Sardina pilchardus (sardine): 134079510
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Entry
134079510 CDS
T10667
Symbol
nova1
Name
(RefSeq) RNA-binding protein Nova-1 isoform X1
KO
K14944
RNA-binding protein Nova
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spil03041
]
134079510 (nova1)
Spliceosome [BR:
spil03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
134079510 (nova1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_NusA_2nd
DUF1233
Motif
Other DBs
NCBI-GeneID:
134079510
NCBI-ProteinID:
XP_062391578
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Position
5:complement(12452691..12472769)
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AA seq
516 aa
AA seq
DB search
MMAGGAVQHNGIFTNPHHLSQPPHMESDPPDSRKRPLETTTEEESSTKRTNVAGEKANRS
RIHKPPFIYLFVCFAEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD
FYPGTTERVCLIQGTVEALNGVHNFIAEKVREMPQNAQKPEPVSILQPQTTVNPDRVKQA
KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQNRKAV
EIIVQKIQEDPQSSSCLNISYSNVTGPVANSNPTGSPYANTADVLPNAAAAATASTLLGQ
ASLASMGGFPTAMSSFSGNDLLAITSALNTLASYGYNTNTLGLGLNPAAASGVLAAVAAS
ANPAAAAAANLLASYASEASGGGHPAPTLGGFSLGSLAAATGASNGYLNASSPLVASSLL
GTEKLTEGGKEVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRK
VTITGSPAATQAAQYLISQRITYEQGVRATNPQKVG
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgatggctggtggagctgttcaacataacgggatattcacgaatcctcaccacctcagt
cagccgccccacatggagtcggatcctcctgattcccgaaaaagaccactagaaactacc
acggaggaggagagcagcaccaagcgcacgaatgtagcgggcgaaaaagcaaataggagc
cgcattcacaaacctccatttatttatttatttgtttgttttgcagaggagggcgagtac
ttcttgaaagtgctgatccccagctatgcagccggatccatcatcggcaagggaggccag
accatcgtccagctgcagaaagagacaggggccactatcaagctgtccaaatccaaagac
ttctacccaggcacaacagagcgcgtctgtctgatccaggggacggtcgaggccctgaat
ggagtgcacaacttcatcgccgagaaggtgagagagatgccccagaatgcacagaagcca
gagcctgtcagcatcctgcagccccagaccaccgtcaacccagaccgcgtcaaacaggcc
aaactgattgtgcctaacagcaccgcggggctgatcatcggtaagggtggcgccaccgtg
aaggccgtgatggagcagtccggcgcctgggtgcagctctcccagaagcccgagggcatc
aacctgcaggagcgcgtggtgacggtcagcggcgagccggagcagaaccgcaaggcggtg
gagatcatcgtccagaagatccaggaggacccgcagagcagcagctgcctgaacatcagc
tactccaacgtgacgggccccgtggccaactccaaccccaccggctccccgtacgccaac
acggccgacgtgctgcccaacgccgccgccgccgccactgcctccacgctcctgggccag
gccagcctggccagcatgggcggcttccccacggccatgtccagcttctccggcaacgac
ctgctggccatcacctcggccctgaacacgctggccagctacggctacaacaccaacacc
ctgggcctcggcctcaaccccgccgccgcgtccggcgtcctggcagcggtagccgccagc
gctaacccggccgccgccgcggccgctaacctgctagcctcctacgccagcgaggcctca
ggcggcggccaccccgcacccaccctggggggcttctcgctgggctctctggccgccgcc
accggggcgtccaacggctacctgaatgcgtcctcccccctggtggcgtcgtccctgctg
ggcaccgagaagctcacggagggcggcaaggaagtggtggagatcgccgtgccggagaac
ctagtcggcgccatcctgggcaaagggggcaagacactggtggagtatcaggagctgacg
ggcgcacggatccagatctccaaaaagggggagttcatccccggcacccgcaaccggaaa
gtaaccatcacgggatcgcccgcggcaacacaggccgcccagtatctcatcagccagcga
atcacgtacgagcaaggcgtccgcgccaccaacccacagaaggtgggctaa
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