Sardina pilchardus (sardine): 134079740
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Entry
134079740 CDS
T10667
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
spil Sardina pilchardus (sardine)
Brite
Messenger RNA biogenesis [BR:
spil03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
134079740 (zc3h12b)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134079740
NCBI-ProteinID:
XP_062391802
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Position
5:4595599..4609661
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AA seq
1002 aa
AA seq
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MVLELAAPASAGPLLQRSIPHIERVFRVRVSYCSAESNCDSANGSNSGNSITVIIQDGNE
DDCAKAKEYIVSLIAPAHYRRVRLTLSLHRRLQTLHAAIEYETGCVLTLREHAVVLQGGE
AQVSTAWAMLQQRPRMESRAPRRQLVPPPQPAATVATATATATGRRREPLMATKPHRQLC
RSPCLDRPSFSQSSTLQELRAEDGGRIGPGGPAGGPARQASERDYQSKMDFALKLGYSGE
QVESVLGKLGSGALINDVLAELVRLGNKGELEAQGGSGQATLAPHGPGVKEAVSPEASLE
EESMESSDNLRPIVIDGSNVAMSHGNKEVFSCMGIQLAVDWFLEKGHKDITVFVPAWRKE
QSRPDAPITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLACDSDGIIVSNDN
YRDLQNEKPEWKKFIEERLLMFSFVNDKFMPPDDPLGRHGPSLENFLRKRPVVPEHKKQP
CPYGKKCTYGHKCKYYHPERPNQPQRSVADELRAFAKLSAVKTMSEGALAKCGTSSGGAS
FKGEPGSEAKRVAPKRQSDPSIRAVACEDERACGVRKAEASSSSVPSLVTALSVPTMPPV
KSHAAAGALNTRSASSPVPGSLHFTHSLLEHAGSVGYPPILVTNSHGASVAYAEPFPKYD
SVVSDHGYYSMLSDFSTMSLGSMQGLDSFCGGGGGGTYPSRPPSLCPEPCRSHSSDSFSS
YGDPYLSSMEGSMDDGSMGGMKGPSQQQQQQQVQSSMGVQGPSASQSRLQAFAHGFHHEA
LTRVQSYGADEPKPGPRKQPPGPPPVQLAPHVQHAVVSARSSCPGDYPPLAQSAVLTSAV
SCPAPQQGRSLGMTRMDSVSDSRLYESNPQRQRRPPLCREQHASWDPLPCGLSEPYGYGA
YGLASGLMPCCERVMVRSMPEKMEQIWRSPWDSPGPPSHQAGLAGHPMDQPDRQPIPEHQ
YQTYRNLCNIFPAYVVHTVMEKNPHLTDPQQLAALIVSKLRH
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atggttttggagctggcagcgcccgcaagtgcaggccctttgctacaacgctccatcccg
catatcgagcgtgttttccgggttagggtcagctactgctccgctgagtcaaactgcgac
agcgctaatggaagcaactcaggcaacagtatcactgtaattatccaggacggcaacgag
gatgactgcgccaaggctaaagagtacatagtgtccctgattgctcctgcccactaccgt
cgagtgcggctgactctgtccctgcaccggaggctgcagacgctgcacgcggccatcgag
tatgagacgggctgcgtgctgacgctgcgggagcatgccgtggtgctgcagggcggagag
gcgcaggtgagcaccgcgtgggccatgctgcagcagcggcccaggatggagtcccgagca
ccgcgccgacagctagtgccgccgccacagccggccgccactgtagccaccgctaccgcc
accgccacgggcaggaggagagagccgctaatggcgaccaagcctcaccggcagctgtgc
cgctcgccctgcctggaccggcccagcttcagccagagcagcaccctgcaggagctgagg
gccgaggacgggggccgcattggccccggaggcccagcagggggccccgcgcggcaggcc
agtgagcgcgactaccagtccaagatggacttcgcgctcaagctgggctactcgggcgag
caggtggagtccgtgctcggcaagctgggctccggagcgctcatcaacgacgtgctcgca
gagctggtccgactgggcaacaagggcgagctggaggcccagggggggtcggggcaggcc
acattggccccccacggccccggggtcaaggaggcggtcagcccagaggcctcgctggaa
gaggagtccatggaaagctccgacaacctgagaccaatcgtcattgatggctccaatgta
gctatgagccatggaaacaaagaggttttctcctgcatggggattcagctggcagtggat
tggttcctggagaaaggccacaaagacatcacggtgtttgtgcctgcgtggaggaaagag
cagtccagacccgacgcccccatcacagatcaggagattctgcggaagctggagaaggag
aagatcctggtgttcaccccctcccggcgtgttcaagggcgccgcgtggtgtgctatgac
gaccgctttatcgtcaagctcgcctgcgactccgacggcatcatcgtctccaacgacaac
taccgcgaccttcagaacgagaagccggaatggaagaagttcatcgaggaacgcctcctc
atgttctcctttgtcaatgacaagttcatgcctccggatgaccctctaggaaggcatggt
cccagtttagagaacttcctacgcaagcgtccggtggtccctgagcacaagaagcagcct
tgtccttacggtaagaaatgcacctacggccacaagtgcaagtactaccaccccgagcgg
cccaaccagccgcagcgctccgtggccgacgagctccgtgccttcgccaagctctcggcg
gtcaagaccatgagcgagggcgccctggccaagtgcgggacgtcgtcgggcggcgccagc
ttcaagggcgagccgggctcggaggccaagcgcgtggcgcccaagcgccagtcggacccc
agcatccgcgcggtggcgtgcgaggacgagcgggcgtgcggcgtgaggaaggcggaggcc
agctccagctcggtgccgtcgctcgtcacggcgctcagcgtgcccaccatgccgccggtc
aagagccacgcggcggccggcgccctcaacacccgctcggccagcagccccgtgcccggc
tcgctgcacttcacccacagcctgctggagcacgcgggcagcgtcggctacccgcccatc
ctggtcaccaacagccacggcgcctccgtggcctacgccgagcccttccccaagtacgac
tcggtggtgagcgaccacggctactactccatgctcagcgacttctccaccatgagcctg
ggcagcatgcagggcctggacagcttctgtggtggaggtggtggtggtacttaccccagc
cggccgcccagcctgtgtcccgagccctgccgcagccactcgtcggactccttctcctcg
tacggggacccgtacctgagctccatggagggctccatggacgacggcagcatggggggg
atgaagggtccatctcagcagcagcagcagcagcaggtgcagtcctccatgggcgtccag
gggccgtcggcgtcccagtctcgtctgcaggccttcgcgcacggcttccaccacgaggcg
ctgacgcgcgtgcagagctacggagcggacgagcccaagcccggtccccgcaagcagccg
cccggtcctccgccggtccagctggccccgcacgtccagcacgccgtggtgagcgcgcgc
tccagttgccccggcgactacccgccgctggcccagagcgccgtgctgacctcggccgtc
tcgtgcccggcgccgcagcagggccgctcgctgggcatgacgcgcatggacagcgtgtcc
gactcgcggctctacgagagcaacccgcagaggcagcgccggccgccgctgtgccgcgag
cagcacgccagctgggacccgctgccctgcggcctcagcgagccctacggctacggcgcc
tacggcctggcctcgggcctcatgccctgctgcgagcgcgtcatggtgcgcagcatgccc
gagaagatggagcagatctggcgctcgccgtgggactcgccgggcccgccgtcgcaccag
gccggcctggccggacaccccatggaccagccggaccgccagcccatccccgagcaccag
taccagacctaccgcaacctctgcaacatcttcccagcctacgtggtgcacacggtcatg
gagaagaacccgcacctcaccgacccccagcagctggccgcgctcatcgtctccaagctg
cggcactga
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