Sardina pilchardus (sardine): 134079903
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Entry
134079903 CDS
T10667
Symbol
tcf7
Name
(RefSeq) transcription factor 7 isoform X1
KO
K02620
transcription factor 7
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04310
Wnt signaling pathway
spil04520
Adherens junction
spil04916
Melanogenesis
spil05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
134079903 (tcf7)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
134079903 (tcf7)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
134079903 (tcf7)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
134079903 (tcf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spil03000
]
134079903 (tcf7)
Transcription factors [BR:
spil03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
134079903 (tcf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
DUF5744
Motif
Other DBs
NCBI-GeneID:
134079903
NCBI-ProteinID:
XP_062392015
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All DBs
Position
5:complement(4806280..4854974)
Genome browser
AA seq
428 aa
AA seq
DB search
MPQLNSGGGDDLGANDEMISFKDEGEQDEKIQENAFTERDLADLKSSLVNESEINQNSNA
AVVRRGHHHHHHDEQRVYPEKHREHLEDVSKQDGGMYKPPYSGYPFLMLTDPYLPGGSVS
PSSNKVSVVQQSHGMTPHGMLLQYPSSDHFNPSPAHLPTDMSQKPGVHRHQSQDLSSFYS
LAPGGVSQISPSMNWQPQPVYPLSSCGFRQSYPSSLPSSSSYPRFSHSLMLGPSGMHPTG
IPHPAIVPPSGKQEHDQYDRNMYAKPHPEPKREKEPKKPVIKKPLNAFMLYMKEMRAKVI
AECTLKESAAINQILGRRWHALTREEQAKYYELARKERQLHMQLYPSWSARDNYDAGLRG
AGAEKRKADGGKKKRRKREKQQQQDPTTDGERLLAAADVFVSTDLRKHSKSPLSVTGCPW
SLSYGPQS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagctcaacagtggtgggggagatgatctcggagcgaacgacgaaatgatttcc
ttcaaggatgaaggcgaacaagacgaaaagatccaggagaacgctttcacggagagggac
ttggctgacctcaagtcgtctttggtgaatgaatcggagataaatcagaactcaaacgca
gcggtggtcaggcgaggacaccaccaccaccaccacgatgagcagagagtttacccagaa
aaacacagagaacatctcgaagatgtgtcgaagcaggatggagggatgtacaagccgcca
tactccggttatccattcctgatgctgacagacccatacctcccaggcggatcagtgtca
ccatcttccaacaaagtgtcggtggtccagcagtcccacgggatgacccctcacggcatg
ctactgcagtatcccagctctgaccacttcaaccccagccctgcacacctgcccacggac
atgagccagaaaccaggtgtccacaggcaccagtcccaggatctgtccagtttctactca
cttgcccctgggggcgtgagccagatctccccctccatgaactggcagcctcagcctgtg
taccccctctcctcctgtgggttcaggcagtcgtacccctccagcctccccagcagctcc
tcctaccccaggttctctcattctctgatgctgggcccctcgggtatgcaccccacaggc
atcccacaccctgcaatagtgcccccctctggcaagcaggagcatgaccagtacgacaga
aatatgtatgccaaaccccacccagagcccaagagagagaaggagcccaagaagccggtg
atcaaaaagccgctcaacgctttcatgctctacatgaaggagatgagggccaaggtgatc
gcagagtgcaccctgaaggagagcgcagccatcaaccagatactggggagacggtggcac
gcgctgacccgtgaggagcaggccaagtactacgagctggccaggaaggagcgacagctg
cacatgcagctctaccccagctggtccgcccgggacaactacgatgcaggccttagaggg
gccggggcggaaaagcgaaaagctgatgggggcaagaagaagaggaggaaacgggagaag
cagcagcaacaagaccccaccacagatggggagaggttgttggcagcagccgatgttttt
gtttccactgacctgagaaagcacagcaagtcgccgctctcagtcactgggtgcccctgg
tctctgtcatacgggccccagtcttga
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