Sardina pilchardus (sardine): 134079924
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Entry
134079924 CDS
T10667
Symbol
fbxo40.2
Name
(RefSeq) F-box only protein 40
KO
K10315
F-box protein 40
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spil04121
]
134079924 (fbxo40.2)
Ubiquitin system [BR:
spil04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
134079924 (fbxo40.2)
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GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
134079924
NCBI-ProteinID:
XP_062392061
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Position
5:5531995..5536356
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AA seq
656 aa
AA seq
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MSYYRNFKSSKLHAHCESCHSRRCRAPVEISVSCAFISCRALCGATFHLCKEQEHTLLCP
NERVPCLNAQFGCPFRMCRCKQAEHLRVCPASVICCSMEWNRWPLEDIQNKFYANLLKDD
NESEALDLSMAIRDQKYLCNRIKMKSLFPELAEQEEEEVPPPPVEEGGAVGGKPFSDASG
VNGGSDYPVGKGPTPATQEEVAAAAAGETPLDKNKFDRYEKMFSMARGGCEQASVQNQDD
KTDNEASSKGSTEPNSVVGHAPWQKGVLERVGQDMTVQEYNMYIVHNGRMLITFGQIDAC
TPRERDFVYGNLEPIPVMTLSNYKPPVSYRGKRIHMKDYSKIPDTEDKYTDTSDLGLSEE
DMHVTDEMYATLLCCAERELRGHKVSETVGIDGNYVDIATQTYSFPTAPFQRDTSLADIT
ADQKLKLYVRTVTESISSRYRTASCPFTFRCGHPFRRDEYPYHYKNVHSDIQFSLEGWFE
QRCPLAYLGCTYVRKNICPLAQKATVSFHQDLNTFSLKPQVCGTVITTAESGPPQAKQAK
YEDSLANLPYEVLCHIASFLDCFTLSQLALVSQLFRDVCATHLQERGMVSLKWRKKSYSH
GGGRWKCSKVWEFSNLFSKVDRWCLADEPSMSAHLKVCPFYQREIKTERTAVMLKD
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgagctattacagaaacttcaaatcctcgaaactacacgcgcactgtgagagctgccac
agccgacgctgcagagcacctgtcgagatctccgtctcgtgcgcgttcatcagctgtcgt
gcgctttgtggcgcgacctttcacctgtgcaaggagcaggaacacacccttttgtgcccc
aatgagagagtgccctgtctcaacgcgcagtttggctgccccttccgcatgtgtcgctgc
aagcaggcagagcaccttcgggtgtgtccggccagcgtgatctgctgctccatggagtgg
aaccgctggcccctcgaagacatacagaacaagttctacgccaatcttttgaaggacgac
aacgagagtgaggctctcgacctctcgatggccatcagagaccagaagtacctgtgcaat
aggatcaaaatgaagtccctcttccctgagttagccgaacaagaggaggaagaagtcccg
ccaccgcctgtggaggagggaggtgcagtaggagggaagcccttctcagatgccagtgga
gtgaacggaggatcggattatcccgttggtaagggccccacgccggccacacaggaggag
gtggcggcggcggccgcaggggagacgcctctcgacaagaacaagtttgaccgctacgag
aagatgtttagcatggcgaggggtggctgcgaacaggcctccgtacaaaaccaagacgac
aaaacagacaatgaggcatcttccaaagggtcaacagagccaaatagcgttgttggacat
gctccgtggcagaaaggggttctggagcgtgttggacaagacatgactgttcaggagtac
aacatgtacatagttcacaacggccgcatgctgattacttttggccaaattgatgcttgc
acgccgagggaaagggactttgtttacggaaaccttgagcccatacctgttatgacactg
agcaactacaaacctccagtgagctacaggggcaaacggatccacatgaaagattactca
aagatcccagacactgaggataagtacactgatacctctgacctgggtctgtctgaggag
gacatgcatgtgacagatgaaatgtatgccaccttgctgtgctgtgcagaaagagagctt
cgtgggcataaagtcagcgagacggtggggatagacggcaactatgtcgacatagcgacg
caaacctacagcttccccacagctccgttccaacgcgacacatcactggccgacatcact
gccgaccaaaagttgaaactatacgtcaggaccgtaacagagagcatctcctcacggtac
cgaacagccagctgtccgttcacctttcgatgtggccacccgttcagacgagatgagtac
ccctaccactacaaaaatgtgcactcagacatccagttctccctggagggctggtttgaa
cagaggtgccctctggcttacctggggtgtacatacgtcagaaagaacatctgtccactc
gcacaaaaagccaccgtctccttccaccaggacctgaacacgttcagccttaaaccgcag
gtgtgtgggacggtcataaccacggccgagtctggtcccccacaggccaaacaggccaag
tacgaggactcactcgccaacctgccctatgaggtcctgtgtcacattgccagttttcta
gactgcttcactttgtcccagctggctttggtgtctcagctgttccgtgacgtctgtgct
actcaccttcaggagagaggcatggtgtcactgaaatggaggaagaagtcatattcccat
ggcggcggccgctggaagtgtagtaaggtgtgggagttcagcaatctttttagcaaagtg
gacagatggtgccttgcagatgagccttctatgtccgcccatctgaaggtctgcccattc
taccaacgggagattaaaacagaacggactgccgtgatgctgaaagattag
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