Sardina pilchardus (sardine): 134080012
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Entry
134080012 CDS
T10667
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1-like
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
134080012
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
spil04040
]
134080012
Ion channels [BR:
spil04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
134080012
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GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
YVC1_C
EXP1
Motif
Other DBs
NCBI-GeneID:
134080012
NCBI-ProteinID:
XP_062392187
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Position
5:7468594..7483264
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AA seq
792 aa
AA seq
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MATPKNQERRPFTLEVDDRTDEERAQSKEQDKKDHWTSAFGVGASKKERSPMDSEYQEDL
GEPSSQIKINRNFMKGMRGITGEAAQDKDRFDMKRLFSAVSSGEVAQLEGLEQYLQRAMK
HLSDSEYRSKGKTALLKALLNLTDGRNDTVKLLLDIAEKMGDLKEFVNAAYTDIYYRGQT
ALHVAIERRSQYFVELLVQKGTDVHAKACGKFFQLHDGPCFYFGELPLSLAACTNQKDIV
DFLLDNQYQNADVRETDSQGNIVLHALVMVADNSPENTDFITKMYDHILTRAAQLHPKVK
LEEFENKQGLTPIKLAAKKGKIELFKHMLHREFQDKETRHLSRKFTEWAYGPVYSSLYDL
SSLDSYEEKSVLEIIAYGTEIPNRLKMLQVEPLSQLLEEKWKRFANPIFIFTFVVYVIYL
SVFTTGAYLRKDRSDQLPPYPLENTLENYFLVSGQIILLLGSVYFFIKGLSDLKRKRPTL
ETLLIDGFYELLFFIQAVLFLASAVLYFCSRKEYLGCMVLCLALSWVNVLYYSRGSKNMG
IYGVMIQKMIVGDILRFLSVYMVFLFGFTAAIVTLLDKQTPDNAKCVPKKTRFFEDIDST
NCTKPTARTFQIITLELFKFTIGMGDLEFTDGYRYIEVFYVLLISYIVLTYILLLNMLIA
LMNKTVEKTSEESTNIWKLQRAITILDIERRLPQCLKRRLRSGVEKDLGNSNGADRRWCF
RVEEVNWIKWNTCLGKIHEDPGIQDFRISLPPPSRPERERSWRGFLRDFSQRRPLQRQQQ
AQEMNLLSVSHA
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaccaaagaaccaggagaggaggccattcaccctggaagtggatgacaggacc
gacgaagagcgtgctcagagcaaagagcaggacaaaaaggatcactggacctctgcattt
ggtgtgggtgcctccaaaaaggaaaggagccctatggactctgaatatcaagaggacctt
ggagagccctcctcacagattaaaatcaacaggaatttcatgaaggggatgagaggaata
acaggtgaagctgcccaagacaaggacagatttgacatgaaaaggctcttttcagcagtt
tctagtggagaggttgctcagctcgaaggactggagcagtacctgcagcgggccatgaag
cacctgtctgactctgaatatcgttccaagggaaagactgctctgctcaaggctctccta
aatctaacagatggcagaaatgacacagtgaaattgctccttgatattgcggagaagatg
ggtgatttaaaagaatttgtcaatgcagcgtatacagacatttattacagaggccagaca
gcccttcatgtagccattgagagaaggagtcaatactttgttgagcttctagttcagaaa
ggaactgatgtccatgccaaagcctgtgggaagttcttccagctgcatgatggaccctgc
ttctattttggagagcttccactttcgctggcagcctgcaccaaccagaaagacatagtt
gacttcctgttggacaaccaataccagaatgcagatgtgcgggagacagactctcagggc
aacatagttctccatgccctggtgatggtagcagataacagccctgaaaatacagatttt
attactaagatgtatgaccacattctcaccagagctgcccagcttcacccaaaagtcaaa
ctggaggagtttgagaacaagcaaggcctcacaccaattaaactagcagccaagaaaggc
aagattgagttgtttaaacacatgttgcatcgagagttccaggataaggagaccagacat
ctttccagaaagttcacggagtgggcctatgggcctgtttactcctcactgtatgacttg
tcatcactggactcctatgaggaaaagtctgttctggagataatcgcttacggcactgaa
atcccgaatcgtctgaagatgcttcaggtggagccactcagtcagctgctggaggagaag
tggaagagatttgctaatccaatatttatcttcacttttgtggtctatgtgatatacctc
agtgtcttcaccactggggcctatctcaggaaagatagatcagatcaactgccaccatac
ccactggagaatacattggagaattattttcttgtatcagggcaaatcatacttctcttg
ggttcggtttacttcttcatcaaagggttatcagatttgaaaagaaaacgtccaacactg
gaaaccttgttaatagatggcttctatgaattgctttttttcatccaggcggtgcttttc
ctggcctccgcggtgctctacttctgtagtaggaaagagtaccttgggtgcatggtgttg
tgtcttgctctcagctgggtcaacgtgctctactactccagaggctccaagaacatgggc
atctatggagtcatgatacagaagatgattgtcggcgacattttacgattcctttctgtg
tacatggttttcctctttggattcacagcagcaatagtcactctactggataaacaaaca
ccagacaatgccaaatgtgtgccaaaaaaaacacgtttttttgaagacattgactccacc
aattgcacaaagccaactgccagaacctttcagatcatcactctggagctgttcaagttc
accattggcatgggagacctggagttcactgatgggtaccgctacattgaggtgttctat
gtgctgctcatctcctacatcgtcctcacctacatcttactcctcaacatgctcatcgcc
ctcatgaacaaaacagtggagaagacctccgaggaaagcacaaacatctggaaactacag
agggccattaccatcctagatatagaaagacgtctaccacagtgtttgaagcgcagactt
cgctctggagtggagaaagacctgggcaatagcaatggagcggaccgtcgctggtgcttc
agagtggaggaagtcaattggatcaaatggaatacctgcttgggtaaaatccatgaagat
cctgggattcaagacttcaggatatcattgcccccacctagcagaccagagagagagaga
agctggcgaggctttctgagggacttcagtcagcgccggcctcttcaaaggcaacagcaa
gcacaagagatgaaccttctctcagtcagccacgcttga
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