Sardina pilchardus (sardine): 134080027
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Entry
134080027 CDS
T10667
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
134080027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spil04121
]
134080027
Enzymes [BR:
spil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134080027
Ubiquitin system [BR:
spil04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134080027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
FANCL_C
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
134080027
NCBI-ProteinID:
XP_062392210
LinkDB
All DBs
Position
5:complement(7837768..7918707)
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AA seq
902 aa
AA seq
DB search
MTVLQRRLAGLWPWLLMAALQVVFGQTGLELAAAVESERSATRAVIKVTLLKHEPTGRPI
TLEGVFAGGSAGYAEGKLMQSHPLSLCNTSEDERPESNFISIVKLESPERNVHHCLPLLD
KARLALERGAQAVIFDVTDHANAEHELQDSDSLPGPVVLVRASHAEELMGLVNKNEEARV
QIEIMVEVQKWPHYDVVILLTVVLAVLAIVMIFAFRYRCKSNRTWDSVHQQTVRAISRLE
TRIYSSQSCSGSQRHQGSRGSGSSSNSSPVCAICLEEFLDGQDLRIISCAHEFHKECVDP
WLLQHRTCPLCMHNIMGAEMAAARLAQRSRMQPPPEHSQAFLHPHPHPHPHPHPHPHPYP
GPHGYPSQHAIPFSLRPSYHRAGPSGPYPPLGHYRGSPPLHPRTLRCRPLGPGCSYQLAP
EGHHMGGGGGGGGGGRVHRTAGGMCRSAGHLGAPSLYGPRTERVRTCHGHRCTSGARAQH
VPGGGIAVVGASGVQQVAHSRQDDGSCSGASYRTERSGYLADGPASDSSSGPCHGSSSDS
VLNCTDVSLQGVYGSWSTFRSSLSSDYDPFVYRPGRGPRRDSLEGTRPRSLDSVMNRSGI
GGIAGIGVCGDELLPPAPPAVFSHVHYHRHRHHYYEDERGQTQGPGRGSDEELGGPAAAV
VMVAAGSGGGIGGPPVPSADKDSPLCSLAHPSCQCPKVGHSDRSSHGGSEGQDKDVDRPL
SALPSPPPPPPPPPCCHQGPPGRQQQQQQQQQRWRAMGSCGLDASPAAGLPTVRFHQSLD
LQDDCSIHIHYGQSPHAAAYCCPPPPPLPPPDMPAAGLLPVPLILDSAGMGEWPCCAGAH
VVWQKRVQQAHSEPQLLLEPVGHDGHRCRARHGHQGAELPADVCLYCQTLHNNQGSEEES
GV
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcctccagcggcgactggccgggctctggccgtggctgctaatggcggccctt
caggtggtgtttggccagactggcttggagctggctgccgcggtggagtcggagcgatca
gccaccagagcggtcatcaaggtgactcttctcaagcacgaaccgaccgggaggcctatc
actctggaaggggtgtttgctggagggagcgccggctacgcagaagggaaattgatgcag
tcccaccctttgtctctgtgcaacaccagtgaggatgagcgcccggagagcaacttcatc
agcatcgtcaagctggagagccccgagcgcaatgtgcaccactgcctgccgctgctggac
aaggctcgactggctctggagagaggtgctcaggctgttatctttgatgtcactgaccat
gctaatgcggagcatgagctgcaggactcggactctctgcccgggcctgtggttctggtg
cgcgccagccacgccgaggagctcatgggcctggtcaacaagaacgaggaggccagggtc
cagatcgagatcatggtggaggtccagaaatggccccactatgatgtggtcattctgctc
accgtggtcctggcagtcctggccatcgtcatgatcttcgccttccgttaccgctgcaag
tccaacagaacctgggattcggtgcaccagcagacggtgcgcgccatcagccgactggag
acgcgcatctacagctcccagagctgctcggggtcacagcgccaccaagggtcccggggg
tccggcagcagctccaactccagtcctgtctgcgccatctgcctggaggagtttctggat
ggacaggatctgcggatcatctcgtgtgcccatgagttccataaggagtgtgtggacccc
tggctcctgcagcaccgcacctgtcctctctgcatgcacaacatcatgggtgcagagatg
gccgccgctcggctggcccagaggagccgcatgcagcctccgcccgagcacagccaggcc
ttcctccacccgcacccccacccccacccgcacccccacccccacccgcacccgtacccc
ggcccccacggctacccctcacagcacgccatccccttctccctgcggccctcctaccac
cgcgcgggcccctcgggcccctacccgccgctgggccactaccggggctcccctccgctc
cacccgcgcacgctccgctgccggcccctgggccccgggtgcagctaccagctggccccc
gagggccaccacatggggggcggaggaggaggaggaggagggggccgcgtgcacaggaca
gcgggggggatgtgccggagcgcggggcacctgggagcgccgtctctgtacgggccgcgt
acggagcgcgtacggacctgtcacgggcaccggtgcacgtccggggcgcgggcacaacac
gtgcccggcggcggcattgccgttgttggcgcaagcggcgtccagcaggtggcgcacagc
cggcaggacgacggcagctgctcgggcgccagctaccgcacggagcgcagcggctacctg
gcggacgggccggccagcgactccagctcgggcccctgccacggctcgtccagcgactcg
gtgctcaactgcaccgacgtcagcctgcagggcgtctacggcagctggtccaccttccgc
agctcgctcagcagcgactacgaccccttcgtgtaccggccgggccgcggcccccgccga
gacagcctggagggaacgcggccgcgctccctggactccgtcatgaaccggagcgggatc
ggcgggatcgccggtatcggcgtttgcggggacgagcttctcccgccggctccgcccgcc
gtctttagccacgtgcactaccaccgccaccggcaccactactacgaggacgagcgcggc
cagacgcaggggcccggccgaggctccgacgaggagctcggggggccggcggcggcggtg
gtgatggtggcggccggtagcggcggtggtatcggtggtccccccgtcccctccgcggac
aaagactcgccgctgtgctcgctagcgcacccctcctgccagtgccccaaggtgggccac
tcagacaggtcaagccacggggggtcggagggccaggacaaggacgtggaccggcctctg
tcggcgctgccctcccctccccctcctcctcctcctcctccctgctgccaccagggccct
ccgggacgccagcagcagcagcagcagcagcagcagcgttggcgtgcgatgggcagctgt
gggctggacgcttcccccgcggcggggctgcccaccgttcgcttccaccagagcctggac
ctgcaggacgactgcagcatccacatccactacggccagagcccccacgccgccgcctac
tgctgcccaccgcctcctcctctccccccgccagacatgcccgcggccggcctgctgccc
gtgcccctcatcctggactcggcgggcatgggcgagtggccgtgctgcgcgggcgcccac
gtggtgtggcagaagcgggtgcagcaggcgcactcggagccccagctcctcctggagccc
gtggggcacgacggacaccgctgccgggctcgccacggccaccagggggcagagctgccc
gccgacgtctgcctgtactgccaaacactacacaacaatcagggatcagaggaggagtct
ggtgtgtga
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