Sardina pilchardus (sardine): 134080237
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Entry
134080237 CDS
T10667
Symbol
dpf2
Name
(RefSeq) zinc finger protein ubi-d4 isoform X1
KO
K13196
zinc finger protein ubi-d4
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
134080237 (dpf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spil03041
]
134080237 (dpf2)
03036 Chromosome and associated proteins [BR:
spil03036
]
134080237 (dpf2)
Spliceosome [BR:
spil03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
134080237 (dpf2)
Chromosome and associated proteins [BR:
spil03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
134080237 (dpf2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DPF1-3_N
PHD
PHDvar_NSD
PHD_4
zf_RING_Vps8
PHD_2
Motif
Other DBs
NCBI-GeneID:
134080237
NCBI-ProteinID:
XP_062392540
LinkDB
All DBs
Position
5:complement(13720018..13737097)
Genome browser
AA seq
415 aa
AA seq
DB search
MAAVVENVVKLLGEQYYRDAMEQCHNYNARLCAERSVRMPFLDSQTGVAQSNCYIWMEKR
HRGPGLAPGQLYTYPARRWRKKRRAHPPEDPRLAFPALKSELDLGLKKDALTSSDGSSLE
ALLKAEPLDKRAALELRAPEDDPSGSEYSTGSLNPSTRVRKRVLEPDDFLDDLDDEDYEE
DTPKRRGKGKGKGRGVSSARKKLDAAAALEDRDKPYACDNTIKQKHISKPSERVCGKRYK
NRPGLSYHYAHSHLADEEGEKEEEPDLRTATPPQPDEPKTPKKGPDGLALPNNYCDFCLG
DSNMNQKTGQSEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSEN
DDQLLFCDDCDRGYHMYCLNPPMAEPPEGSWSCHLCLDLLKEKASIYQNQNAPPS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtcgtggagaatgttgtcaaactgctgggggagcagtactatagagatgcc
atggaacagtgccataactacaacgcccgtctgtgtgcggagcgcagcgtcaggatgccc
ttcctcgactcccagacaggagtcgcccagagcaactgctacatctggatggagaagaga
cacagaggaccaggactggctccaggacagttgtacacttaccctgcccggcgatggagg
aagaagcggagagcccatccacctgaagacccccggctggccttccccgcccttaagtca
gagctggacctgggcctgaagaaagacgccctcacgtcctccgacggcagcagtctggag
gcgcttctgaaggccgagcccctggacaagcgcgcagcactcgagctacgggctccagaa
gacgatcctagcgggtcggagtacagcaccgggagccttaatccttccacacgcgtacgg
aagagagtcctggagcctgatgacttcctggacgacctggatgatgaagactatgaggag
gatactcccaagagacgcggcaaagggaaaggcaagggtcgcggggtcagcagcgcccgc
aagaagttggacgccgcggcagcgcttgaggaccgagacaagccctatgcctgtgacaac
actatcaaacaaaagcatatttcaaaaccttccgaacgagtctgtgggaagcgctataag
aaccggccaggtctgagctaccactacgcccactctcatctggcggacgaggagggggag
aaggaggaagagcccgaccttcgcacagcaaccccgccccaaccagacgagcccaagaca
ccgaagaaggggcctgacggtctggccctgcccaacaactactgtgacttctgcctgggc
gactccaatatgaaccagaaaacgggccagtcagaggagctggtctcctgctccgactgt
ggccgctcgggtcacccctcatgtctgcagttcacgcctgtgatgatggcggcggtgaag
acgtatcgctggcagtgcatcgagtgcaagtgctgcaatatctgcggcacatcagaaaat
gatgaccagctgctgttctgtgatgactgtgacagaggctaccacatgtattgtctcaac
ccgcccatggcagaacctccagaagggagctggagctgtcacttgtgtctggacctgttg
aaagaaaaagcctccatataccagaaccagaatgctccgccatcgtga
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