Sardina pilchardus (sardine): 134080294
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Entry
134080294 CDS
T10667
Symbol
gabra1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04080
Neuroactive ligand-receptor interaction
spil04082
Neuroactive ligand signaling
spil04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
134080294 (gabra1)
04082 Neuroactive ligand signaling
134080294 (gabra1)
04519 Cadherin signaling
134080294 (gabra1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
spil04040
]
134080294 (gabra1)
Ion channels [BR:
spil04040
]
Ligand-gated channels
GABA-A
134080294 (gabra1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
134080294
NCBI-ProteinID:
XP_062392620
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All DBs
Position
5:complement(16037009..16060407)
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AA seq
473 aa
AA seq
DB search
MSTLDGTPVLAGRMFAQHRTHFLCIIWACLLVATVFGGKSSGQNGVTDELKDNTTVFTRI
LDSLLDGYDNRLRPGLGERVTEVKTDIFVTSIGPVSDHDMEYTIDVFFRQSWKDERLKFK
GPMAVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEEGTLLYTMRLTVRAE
CPMHLEDFPMDAHACPLKFGSYAYTRSEVVYVWTRGAMQSVVVAEDGSRLNQYDLMGQTV
DSGVVQTSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVF
GVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWD
GKSVVPEKQKKKKESLLQKNNTSYAAATATAFAPNIARDPGLATIAKSAPPPPTEPKEEP
KPKPPEAKKTFNSVSKIDRIARIAFPLLFGTFNLVYWATYLNKKPKLQGMQPH
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactttggacgggacacctgtgctcgctggaaggatgttcgcccagcatcgaacc
cacttcttgtgtataatatgggcctgcttacttgtggcaaccgtgttcggagggaaaagc
tcgggacagaatggtgttacggatgaactgaaggacaacaccacagtgttcacgaggatc
ctggacagccttctggacggatacgacaaccgtctaaggccagggctcggagagcgtgta
accgaagtcaagactgacattttcgtgacgagtatcgggcctgtctccgaccacgacatg
gagtacaccatcgacgtgttcttccgacaaagctggaaggacgagaggctaaagttcaag
gggcccatggccgtgctccgtctcaacaacctgatggccagtaaaatctggacgccggac
acgttctttcacaacggaaagaagtctgtcgcacacaacatgaccatgcccaacaagctc
cttcgaattacagaggagggcactctgctttacacgatgaggctgacggtcagggcagag
tgtcccatgcaccttgaggactttcccatggacgcccatgcttgcccactcaagtttggc
agctacgcctacacccgctcagaggtggtgtatgtgtggacgagaggagcgatgcagtct
gtggtggtggccgaggacggatcccgactcaatcaatacgacttgatggggcagacggtg
gactccggagtggtccagaccagcactggagagtacgttgtcatgacgacacacttccac
ttgaagaggaagatcggctactttgtcattcagacctacttgccgtgcatcatgacagtc
atcctgtcccaggtgtccttctggctcaaccgggagtccgtgcctgccaggactgtgttt
ggagtgaccactgtactgaccatgaccaccctcagtatcagcgctaggaactccctcccc
aaggtggcctacgccacggccatggattggttcatcgccgtgtgctatgccttcgtgttc
tcggccctcatcgagttcgccaccgtcaactacttcacaaagagaggctatgcttgggac
ggaaaaagcgtggtgccagagaagcaaaagaagaagaaggagtccctcctgcagaagaac
aacacgtcgtacgccgccgccaccgccacagccttcgccccgaacattgccagggacccg
ggcttggccaccatcgccaagagcgcccctccgcctcccaccgagcccaaggaggagccc
aagcccaagccgccagaggccaagaagaccttcaacagcgtcagcaagatcgacaggatc
gctagaatagccttccccttgctcttcggaaccttcaacctggtctactgggcaacatac
ttgaacaagaagcccaaattacagggcatgcaaccccactaa
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