Sardina pilchardus (sardine): 134080315
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Entry
134080315 CDS
T10667
Symbol
rin1a
Name
(RefSeq) ras and Rab interactor 2
KO
K17638
Ras and Rab interactor 1
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spil04131
]
134080315 (rin1a)
Membrane trafficking [BR:
spil04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
134080315 (rin1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
SH2
YtxH
SH2_1
BUD22
Motif
Other DBs
NCBI-GeneID:
134080315
NCBI-ProteinID:
XP_062392671
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Position
5:16790803..16801008
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AA seq
838 aa
AA seq
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MQTDPVYDFPDAQPVGERRACPQRGSLKSISVLDRLLLTHPVWLQLSINSATALHVLQRE
PPGTFLVRKSSTSQKKVLCVRLADDSVPSFVKQFVIREEDSTFSLESSAIRFPDLCRLIA
FYCVSRDVLPFTLELPEAIARASSHKQLESISHMGVEFWSSQLNFRGPRNGPQPAADVPP
PPLPALRPEDCITPIENPTLFEEFCPIRTRSPRELDIGTGQGALCFINPLFLQDEPSRSA
LHRRNRFKRSIKVRVSTENTSMLSPPVAPPPPPPLLAKKKGKGVRQKATAVVDEAKDEAK
DRPKESAAAPEEVSDYRAPTLPLPKKTRALVPPTLSPTAEEDDYQMPKALLENCGQRREE
EEEEEEEGEEEEEEEEELSEDAGLVLEQRRAPSLSELESSSSLSSLDEAEEAERPPMSRG
TSAPAAPLPSPPPQPPQPVSALRKMSAAFVSFFMPEKRVARMVEELSRDRRLAFGGLVQD
FLRQQRESLKLRKATSAVEMLQGIRHFLSQAKAFLQDCGELEPPIETLLPEDEKDQALEK
AMFRSVLKPLKGQIDGALCALHDRDGSTQRLAESLKKARKSSPLELFGVQVNVPDAQGVE
KVRQKLITLQRAYSPIDKVLLLLQVCKLIYKAMNKDKRKEFGADDFLPALSYVIVQCNLP
ELLIEVEYMMELLDTPWLTGEGGYYLTSVYASLCLIQSEPTTPPASGLTREARESLKQWS
HRRSNDSKRGNTLQQRFVKVLFQNEESSLVKTLQWKKGVNVEALAQLCAAKFGISEPEDY
SLFWRKDGEAEPLSPDSKIDDFLALSGNRSPLIYQLQNPDAKSRKLTRGGAVDLVESV
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgcagacggaccccgtgtacgacttccccgacgcccagccggtgggggagaggcgggcg
tgtccccagaggggctccctgaagagcatcagcgtgctggaccgtctgctgctcacacac
cccgtgtggctacagctgtccatcaactctgccactgcccttcacgtcctgcagcgggag
cctcccgggacattcctggtgcgcaagtccagcacatctcagaagaaggtgctctgtgtg
cgtctggccgatgacagcgtgccttcctttgtgaagcagtttgtgattcgcgaggaggac
tccactttctccctggagagctcagccatacgcttcccagatctctgccgtctcatcgcc
ttctactgcgtcagccgggatgtcctaccatttactcttgaactgccagaggccatagcc
agagcctcatcacacaagcaacttgagtcaatctctcacatgggtgtagagttctggagc
tcgcagctgaacttccgggggcctcgtaacggccctcagcccgccgcagatgttccaccc
ccgccgctcccggctctccggcccgaggactgcatcacgcccatagagaaccccaccctg
ttcgaggagttctgccccatccgcacgcggagcccccgcgagctggacatcggcacgggc
cagggggccctgtgcttcatcaacccgctcttcctgcaggacgagccgtcgcgcagcgcc
ctgcaccgccgcaaccgcttcaagcgcagcatcaaggtgcgcgtgtccaccgagaacacc
agcatgctgtcgcccccggtcgcccctccgccgccgccgccgctgctggccaaaaagaaa
ggcaaaggcgtgcggcagaaggccaccgcggtcgtggacgaggccaaggacgaggccaag
gacagaccaaaggagagcgcggcagcaccagaggaggtctcagactaccgggcgcccacc
ttgccgctacccaagaagacgagagctctggtgccacccactctctcgccaacagcagag
gaggacgactatcaaatgccaaaagctttgctagagaactgtggtcagagaagggaggag
gaggaagaagaggaggaggagggtgaggaagaggaggaggaggaggaagagttaagtgaa
gacgcggggctggtgctggagcagaggcgtgctccgtccctcagcgagctggagagcagc
agctccctcagcagcctggacgaggccgaggaggccgagcggccgcccatgtccaggggc
accagcgcgccggccgccccgctccccagccctcctccgcagccgccccagcccgtgtcc
gccctgcgcaagatgagcgccgccttcgtctccttcttcatgccggagaagcgcgtggcc
cgcatggtggaggagctgtcgcgcgaccgccgcctggccttcggcggcctcgtgcaggac
ttcctgcgccagcagcgcgagagcctcaagctgcggaaggccacctcggccgtggagatg
ctgcagggcatccgccatttcctctcccaggccaaggcgttcctccaggactgcggggaa
ctggagccccccattgagaccttgctgccagaggatgaaaaagatcaggctctggagaag
gccatgttccgctccgtcttgaagcccctgaagggacagatcgacggggccctctgcgcc
cttcacgacagagacggctccacccagcgcctggccgagagcctcaaaaaggcgcggaag
agctcgcccctggagctcttcggggtgcaggtcaacgtgccagatgcccagggcgtagag
aaggtacggcagaagctcatcaccctacagcgcgcctactctcccattgacaaggtgctc
ctgctgctacaagtgtgcaaactcatctacaaggccatgaacaaagacaaacggaaggag
tttggtgcagatgacttcctgccagctctctcctatgtgattgtacagtgtaacctacca
gagcttctgatagaggtagagtacatgatggaactgctggacaccccgtggctcactgga
gaaggtgggtactacctgaccagcgtttatgccagcttgtgcctcatccagagcgagccg
acgactcctcctgccagtgggctgactcgagaggcccgcgagtcgctcaaacagtggagt
caccggcgcagcaacgactccaagagagggaacactctgcaacagaggtttgtgaaagta
ctcttccagaatgaggagagtagcttggtgaagaccctccagtggaagaaaggggtaaac
gtggaggccttggcccaactctgtgctgccaagtttggcatcagtgagccagaggactac
agtctcttctggagaaaagatggggaggctgagccactctcccccgactctaaaattgat
gacttcttggccttgagtggcaataggtctccccttatttaccagctccagaaccctgat
gccaagtcacgcaaactgaccagagggggcgctgtggaccttgtggagtcggtgtaa
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