Sardina pilchardus (sardine): 134080330
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Entry
134080330 CDS
T10667
Symbol
bbs1
Name
(RefSeq) Bardet-Biedl syndrome 1 protein
KO
K16746
Bardet-Biedl syndrome 1 protein
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
spil03037
]
134080330 (bbs1)
Cilium and associated proteins [BR:
spil03037
]
Primary cilia and associated proteins
BBSome
134080330 (bbs1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BBS1
GAE_BBS1
BBS2_Mid
PHTB1_N
Motif
Other DBs
NCBI-GeneID:
134080330
NCBI-ProteinID:
XP_062392698
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All DBs
Position
5:16948237..16958607
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AA seq
622 aa
AA seq
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MHVDGSASSADSLGNCSLKEGWYRNRGIWENKLITMSAAQTEQENSMASSKWLDAHYDPV
ANLYTFSSCMALADLHGDGESKLVVGDLGTGANNMKLKVFRGTGLLSENTLLDLPTGLVA
FLMDQHEPRTPAVAVASGPYIYVYKNLRPYFKFTLPSLEINGLEQDVWIQAREDMIDTMT
LKEMLEGIRDKAEVPLSVRSLRFLMLEPQDMEAFVNLHKDQPIRRQTVITCIGTLKKNMA
DEDAVSCLVIGTENKDIFILDPEAFTILSKMSLPSVPTMMDVTGQFDVEFRITVACRNGN
IYILRRDSPQPKYCIELAAHPVGLVRIGKNVVVGCAQETLQGYTQKGKKLWTVYLPAPVT
TMGVMDLPTRGFEAVLVALASCEVHVYRDKNLVSTIKTPDVVTSICFGRYGREDGTLIMS
TKGGGLIVKILKRTAVFEDRDSAPGPPLAQSIRLNVPKKTKLYVDQTMRERENAVAMHRA
FQMDLSRLRLAAARAYVKALESSLTPMSSSITEPLKMNAVVQGLGPSFKLTLNIQNTAAS
RPVMNLVVCFLFDERLYSMKTAFFKIPLLVPGLNYPIDTFVECLTDKGISDIIKVFVLRE
GKSAPLLTAHINMPISEGLPLN
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtggatggttctgcatcgagtgctgactcgctggggaactgttctttgaaggaa
ggctggtatcgtaacagagggatttgggaaaacaagcttatcaccatgtctgctgctcag
actgagcaagagaattccatggccagttctaaatggcttgatgcacattatgatcctgtg
gcgaatctctacacattttcgtcttgcatggctctagctgacttacatggagatggcgag
agcaagctggtggttggtgatctgggcacaggtgcgaataacatgaagctgaaggtgttc
cgtggcacggggttactgagtgagaacaccctgctcgacctgcccaccggcctggtggct
ttcctcatggaccagcacgagccgcgcacaccggccgtagcagtggcatcgggcccttac
atctacgtgtacaagaatctccgcccgtacttcaagttcaccttgccctcgctggagatc
aatggcctggaacaggatgtgtggattcaagccagggaggacatgattgacaccatgacc
ctaaaggaaatgttggagggaataagggacaaagctgaagttcctctctccgtcaggtcg
ttaaggtttctgatgctggagccacaggacatggaggctttcgtcaacttgcacaaagat
cagcccatacggagacagacggtcatcacatgcataggcacactgaagaagaacatggcg
gatgaggacgcggtcagctgtctggtcattggcacagagaataaggatatcttcattttg
gacccagaggctttcaccatcctctccaagatgtctttgccaagtgtgcctacgatgatg
gacgtgactggtcagtttgatgtcgagttccgcatcacggtggcgtgtcgcaatggaaat
atatatatcctgcgtagagattctccgcagcccaagtactgcattgagctggccgctcac
cccgtgggcttggtgaggatagggaagaacgtggttgtggggtgtgctcaggagaccttg
caaggttacacacagaaggggaagaagctatggaccgtctacctgcctgccccagtgacc
accatgggcgtgatggatctgcccacgcggggttttgaggctgtgctggtggccttggcc
agctgcgaggtgcatgtgtatcgggacaaaaatctcgtgagcaccatcaagactccggac
gtggttaccagcatttgcttcggtcgttatgggcgagaggatggtaccttaatcatgtct
accaaaggtggaggtttgattgtgaagatcctgaagaggacagcggtctttgaggacagg
gactctgccccggggccccctctggctcagagcatccgcctgaacgtccccaagaagacc
aagctgtacgtggaccagaccatgagggagagggagaatgctgtggctatgcacagggcc
ttccagatggacctgagccgtctgcgtctggcggcagcgcgggcctacgtgaaggccctg
gagtccagcctcacgcccatgtcctccagcatcacggagccgctcaagatgaacgcagtg
gtccagggtttgggcccgtccttcaagctcacgctgaacatccagaacacggccgccagc
cgccccgtcatgaacctggtcgtctgcttcctgttcgatgagcgcctctacagcatgaag
acggccttcttcaagatcccgctgctggtccctggcctgaactatcccatcgacacgttt
gttgagtgcctgactgacaaaggcatttcagacatcatcaaagtgtttgttctgagagag
gggaagagtgcccccctattgacggcccacatcaacatgcccatcagcgagggtctgcct
ctcaactga
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