KEGG   Sardina pilchardus (sardine): 134080447
Entry
134080447         CDS       T10667                                 
Name
(RefSeq) F-box and WD repeat domain-containing 11-B
  KO
K03362  F-box and WD-40 domain protein 1/11
Organism
spil  Sardina pilchardus (sardine)
Pathway
spil04114  Oocyte meiosis
spil04120  Ubiquitin mediated proteolysis
spil04218  Cellular senescence
spil04310  Wnt signaling pathway
spil04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:spil00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    134080447
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    134080447
   04340 Hedgehog signaling pathway
    134080447
 09140 Cellular Processes
  09143 Cell growth and death
   04114 Oocyte meiosis
    134080447
   04218 Cellular senescence
    134080447
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:spil04121]
    134080447
   03036 Chromosome and associated proteins [BR:spil03036]
    134080447
Ubiquitin system [BR:spil04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     134080447
Chromosome and associated proteins [BR:spil03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     134080447
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_TEP1_C WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-TrCP_D Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_EML WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 ANAPC4_WD40 F-box-like Beta-prop_DCAF12 Beta-prop_IP5PC_F Beta-prop_SPT8 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_DCAF4 NBCH_WD40 WD40_like Beta-prop_IFT140_1st Beta-prop_HPS5 F-box Beta-prop_WDR11_2nd Beta-prop_Nup120_160 WD40_RFWD3 Beta-prop_VPS8 Beta-prop_WDR19_1st PEP5_VPS11_N WD40_2 DUF1513 DUF4508
Other DBs
NCBI-GeneID: 134080447
NCBI-ProteinID: XP_062392873
LinkDB
Position
5:20885679..20902926
AA seq 525 aa
MEPEMEDKTVELMNTSVMESQTGDLSPKTTTVFKITNGPMTGSRKRPSEGNYQKEKDVCI
QLFDQWSEADQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITVLPAQGLDHIAENILS
FLDARSLCSAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERHQWEKYLFKNRTT
EVPPNSYYRSLYPKIIQDIETIEANWRCGRHNLQRIQCRSENSKGVYCLQYDDDKIISGL
RDNSIKIWDKQSLECLKILTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNSGEVLNTLI
HHNEAVLHLRFCNGLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDFDDKYIV
SASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR
VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFR
LQFDEFQIISSSHDDTILIWDFLNVSTNGQNEGRSPSRTYTYISR
NT seq 1578 nt   +upstreamnt  +downstreamnt
atggagccggagatggaggacaaaaccgtggagcttatgaacacctccgtcatggagtca
cagacaggggatctctcccccaagacaaccacagtgttcaagatcaccaacggtcccatg
acgggctcacggaaaaggccatcggagggtaactaccagaaggagaaggacgtctgcata
cagctgttcgaccagtggtccgaagcggaccaggtggagtttgtggagcaccttatctcg
cgcatgtgccactaccagcacggccacatcaactcctacctcaagcccatgctccaaagg
gatttcatcacagtactgccagctcagggtctggaccacatagcggagaacatcctgtcg
ttcctggacgcgcgctcgctgtgctcggccgagctggtgtgtaaggagtggcagcgagtc
atctccgagggcatgctgtggaagaagctgattgaacgcatggtccgcaccgaccccctc
tggaagggcctgtcggagaggcaccagtgggagaagtacttattcaagaaccgaacgaca
gaagttccgccaaattcctactaccgctccctgtatcccaaaataatccaagacatcgag
actatcgaggccaactggcggtgtgggcggcacaacctgcaaaggattcagtgtcgctcg
gagaacagcaagggcgtttactgcctgcagtacgacgacgacaaaatcatcagcggcctg
cgagacaactccatcaagatctgggataaacagagcctggagtgtctgaagatcctgacg
ggacacaccggctctgtgctctgcctgcagtacgacgaacgggtcatcgtcacgggttcc
tcggactccactgtcagggtgtgggacgtgaactcgggcgaggtgctcaacacgctcatc
caccacaacgaggcggtgctccacctgcgcttctgcaacggcctgatggtgacgtgctcg
aaggaccgctccatcgccgtgtgggacatggcctcgcccaccgacatcagcctgcgccgc
gtgctggtgggccaccgcgccgccgtcaacgtggtcgacttcgacgacaagtacatcgtg
tccgcctcgggcgaccgcaccatcaaggtgtggagcaccagtacgtgtgagtttgtgcgc
acgctgaacgggcacaagcggggcatcgcctgcctccagtaccgggacaggctggtggtc
agcggctcgtctgacaacactatcaggttgtgggatattgagtgtggtgcatgtttgcga
gttctggagggccacgaggagctggtccggtgcatacggttcgacaacaagcggattgtt
agcggagcgtatgacggtaaaattaaagtatgggacctgcaggccgccctggacccccgc
gctccggccagcacgctgtgtctgcgcacactagtggagcactccggtcgagtcttcagg
ctccagtttgacgagttccagatcatcagcagttcccatgacgacactattctcatatgg
gacttcctcaatgtgtcaaccaatggacaaaatgaagggcgatcgccctcccgcacgtat
acatacatctctagatag

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