KEGG   Sardina pilchardus (sardine): 134080491
Entry
134080491         CDS       T10667                                 
Symbol
pafah1b1b
Name
(RefSeq) lissencephaly-1 homolog B
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
spil  Sardina pilchardus (sardine)
Pathway
spil00565  Ether lipid metabolism
spil01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:spil00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    134080491 (pafah1b1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:spil03036]
    134080491 (pafah1b1b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:spil04147]
    134080491 (pafah1b1b)
Chromosome and associated proteins [BR:spil03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    134080491 (pafah1b1b)
Exosome [BR:spil04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   134080491 (pafah1b1b)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_EML_2 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_EML WDR90_beta-prop_4th NBCH_WD40 Beta-prop_Vps41 Beta-prop_Nup120_160 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_IFT140_1st LisH Beta-prop_SPT8 Beta-prop_DCAF12 LisH_PAC1 eIF2A Beta-prop_WDR35_TULP_N Beta-prop_WDR75_2nd Beta-prop_NUP159_NUP214 Pox_A_type_inc SutA-RBD DUF2570
Other DBs
NCBI-GeneID: 134080491
NCBI-ProteinID: XP_062392951
LinkDB
Position
5:complement(23055131..23079679)
AA seq 410 aa
MVLSQRQRDELNRAIADYLRSNGHEEAYSVFKKEAEMDMNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLSDAKEEITLGGPIGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPLF
SVMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQSGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIISASRDKTMKMWEVATGYCVKTFTGHREWVRMV
RPNQDGTLLASCSNDQTVRVWVVASKECKAELREHEHVVECISWAPESAHPTILEATGSE
NKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGIMFHPGGKFIVSTADDK
TLRIWDYKNKRCTKTLTAHEHFVTSLDFHKTSPYVVTGSVDQTVKVWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggtgctgtcgcagaggcaacgtgacgagctaaatcgagcgatagctgattacctccgg
tccaacggccatgaagaggcatactccgtttttaagaaagaagcagagatggacatgaat
gaggaattagacaagaaatatgcaggccttttggaaaagaagtggacatcagtcatcaga
ttacaaaagaaagttatggaactggagtccaagctgagcgacgctaaggaggagatcacc
ctaggaggccccatcggccagaagagggaccccaaagagtggatccctcggcccccagag
aagtacgccctgagcggccacaggagccccgtcacacgcgtcatattccacccgctcttc
agcgtcatggtgtccgcctccgaagatgccactattaaggtttgggactatgaggcggga
gactttgagcgcaccctgaagggccacacggactctgtgcaggacatctcctttgaccag
tcgggcaagctgctggcctcgtgctccgcggacatgaccatcaagctctgggacttccag
ggcttcgagtgcatcaggaccatgcatggccatgaccacaacgtgtcgtcagttgccatc
atgcccaacggtgatcacataatctctgcatccagagacaagaccatgaagatgtgggag
gtagccactggctactgcgtgaagacgttcacgggccacagggagtgggtgcgcatggtg
cggcccaaccaggacggcacgctgctcgccagctgctccaacgaccagacggtgcgcgtg
tgggtggtggcctccaaagagtgcaaggccgagctgcgggagcacgagcacgtggtggag
tgcatctcctgggcgcccgagagcgcacaccccaccatcctggaggccaccggctcagag
aacaagaagagtggcaagcctggtccattcctgctctctggctccagagacaagaccatc
aagatgtgggatgtcagtacgggcatgtgtcttatgacgctggttggccatgataactgg
gtgcgtggcatcatgttccaccccggtggcaaattcattgtgagcaccgccgacgacaag
accctgcgcatctgggactacaagaacaaacgctgcaccaagaccctgacggcccacgaa
cactttgtaacctctcttgatttccataagacgtctccctacgtggtgaccggaagcgta
gatcaaacagtcaaagtctgggaatgccgctga

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