Sardina pilchardus (sardine): 134080537
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Entry
134080537 CDS
T10667
Symbol
cux1a
Name
(RefSeq) homeobox protein cut-like 1 isoform X1
KO
K09313
homeobox protein cut-like
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spil03000
]
134080537 (cux1a)
Transcription factors [BR:
spil03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
134080537 (cux1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
ATG17_like
Motif
Other DBs
NCBI-GeneID:
134080537
NCBI-ProteinID:
XP_062393021
LinkDB
All DBs
Position
5:24294698..24407773
Genome browser
AA seq
1471 aa
AA seq
DB search
MAANAGSMFQYWKRFDLQQLQKELDATAAALANRQDESEQSRKKLIDQSREFKKNTPEDL
RKQIAPLLKGFQAEIDALCKRSKESEAAFLNVYKRLIDVPDPVPALEVVQQLQLETQRML
DGETENQKLLETLKEHDAESAEVQNHELTIKALQEKIEEYKRSLQSRGSDQEDAPPNDFV
ERERDLQEKHDALAARLQETELKTQTLETELEAARAELKELKEKYSEEAATKADRMETVA
SDLEEANQRAEAAEREMESLREQIASTSKSPHPSPQTHKAPDTAAEELSCGGGGGGLEAE
VSVRDGEVRRLEEDVGRLQASLTQLSQSSSSRISQLQHELSSKDSTLKQLEKKLQEQADY
EEVKKELSVLKSMDLSTTERSTAQDGYKPLEMLLLEKCGGGQSDHHSHRSANSGLSGSSL
RGDKDSSSGDAHQRLPATPVPSPSPLRGSPPPSSSSSSQLLMLQQRSLSSASAAEQASSA
GVSANGAHPFSPADLLPPGMAGLGAGPLAPLAGKVALSSLLQRQLMHSFYSKALQDSSLL
FPGPHHGAHHHAGTHALAASPLPSQPAAASPDAANGSAPSPSRSEGAGSASEGEDMDTSE
IARQVKEQLIKHNIGQRVFGHYVLGLSQGSVSEILARPKPWSKLTVRGKEPFYKMRQFLS
DEQNILALRSIQGRQRENPGQNLNRVFQEVPKRRTGSEGSSRPGNITTRIRTPEGGSDEA
IRSILEQAKRELQVQRADGVGESEPPPAYPRGFGSFSQKYAHILSLVESSLPATSCGPAE
AMRCVMESQAASLKASLPHSELSLLGPKLLSSPLSYSPMALSLKKPPPSPAPLPEPPGLP
VVKKEGEDTPISDTPLGGASSSLSSWRDWGNIQSDRRWSGALLMTDDAFNQDEKPPRLPA
VALPPSSLDPWKDWAGGGGGGGGSGSGGGGADSPYPQTSPQNSPLPSSSSSPLLALNKPA
KAPVPPLTPEQYELYLHQDVDTVELTQQVKERLAKNGICQRMFGEKVLGLSQGSVSDMLS
RPKPWSKLTQKGREPFIRMQLWLNTELGQGLLQLQPPTHEMTPKTSASCSPAPESPVSSA
EESVKSQDPGAAPPPAPASSSTTASEQGEAAESQPGTPLPLPLPLLPGPPGLTIQEMVAM
SPELDTYAITKKVKEVLTDNNLGQRLFGESILGLTQGSVSDLLARPKPWHKLSLKGREPF
VRMQLWLSDPRNVEKLMDMKRMEKKAYMKRRHSSVSEVVPSDGGVSSGDFGPSCSPQQHL
KKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELASQLNLKTSTVINWFHNYRSRIRRELF
IEEIQAAAGEGAARAAEGESSCDGTESDSGGGGGGSGSVGAEDRGRSLSSSPKPNHHHHH
HHHHHHHSQAHLSEDALTTTPGTSDSSKSGGMESLFGGAIATTVAASATATADKNPKDSS
VRRRKAANLNNIIHRLEKAANRDELGNEWEF
NT seq
4416 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaatgcgggatcgatgtttcaatattggaagcgctttgatttacaacagctc
cagaaagaactggatgccaccgccgcagcgctggccaaccgacaggatgagagcgagcag
tccaggaaaaagctcatcgaccagagccgagagttcaagaaaaacactccagaggattta
cggaagcagatagctccactgctgaagggatttcaagcagagatcgacgccctgtgcaag
cggagtaaggagtccgaggcagctttcctcaacgtctacaagagattaattgatgtccca
gaccctgtgccagccctggaggttgtgcagcagctacagctggagactcagaggatgctg
gacggcgagacggagaaccagaaacttctggaaacgctcaaggagcacgacgcggagagc
gccgaggttcaaaaccacgagctcaccattaaagcacttcaggagaagatagaggagtat
aagaggtcactacagagtcggggctcagaccaggaggatgctccacccaacgactttgtg
gagagagagagggatcttcaggagaagcatgacgctctggccgccagactacaggagacc
gagctcaaaacacagaccttagagacagaactcgaagcagcccgagcagagctgaaagag
ctgaaggagaagtatagcgaggaggcggccacaaaggccgacaggatggagacggtggcg
tctgacctagaggaagccaatcagagagcagaggcagcagagagagagatggagagcctg
agggagcagatcgcctccaccagcaagagccctcacccctccccacagacacacaaggcc
ccagacacggctgcggaggagttgtcgtgcggcggcggcggcggtggcctggaggcggag
gtgagcgtgcgtgacggcgaggtgcggcgtctggaggaggacgtgggccggctgcaggcc
agcctcacccagctcagccagagctccagcagccgcatcagccagctgcagcacgagctc
tccagcaaggactccactctcaagcaattggagaagaagttgcaggagcaggcagactat
gaggaggtcaagaaggaactgagcgtcctcaagtccatggatctgagcacgacagagagg
tccacagcacaggatggctataagcccttggagatgcttctcctggagaagtgtggaggc
gggcagtcggaccaccactctcaccggtcagccaacagcggcctgagcggctcttcgctg
cgtggcgataaagactcgtcgtccggggacgctcaccagcggctccccgccacacccgtc
ccgagtccctctcccctgcgcggctccccgcccccgtcatcatcgtcctcctcccagctc
ctgatgctgcagcagcgctccttgtcatcggcgtcggcggccgagcaggcctcctcggcg
ggcgtgagcgccaacggcgcgcaccccttctcgcccgccgacctgctgccgccgggcatg
gcgggcctgggcgccgggccgctggccccgctggccggcaaggtggcgctcagctcgctg
ctccagcgccagctgatgcacagcttctacagcaaggcgctgcaggactcgtcgctgctg
ttcccgggaccgcaccacggcgcccaccaccacgcgggcacgcacgccctcgccgccagc
ccgctgcccagccagccggccgccgccagcccggacgccgccaacggctcggcgccgtcg
cccagccgctcggagggcgccggcagcgcctcggagggcgaggacatggacacctcggag
atcgcgcggcaggtcaaggagcagctcatcaagcacaacatcggccagcgcgtcttcggc
cactacgtgctgggcctgtcgcagggctcggtcagcgagatcctggcgcggcccaagccc
tggagcaagctgaccgtgcgcggcaaggagcccttctacaagatgcggcagttcctgtcc
gacgagcagaacatcctggcgctgcgcagcatccagggccgccagagagagaacccaggc
cagaacctgaacagggtgtttcaggaggttccgaagcgaagaaccggctccgaaggctcc
tcgaggccagggaacatcaccacacggatccgcaccccggagggcggctcggacgaggcc
atccgctccatcctggagcaggccaagagggagctgcaggtgcagagagcagatggcgtg
ggcgagagcgagccacctcccgcttacccccggggctttggaagcttctcccaaaaatat
gcccacattctcagcctggtagagtcgtctctgcccgccacctcctgcggcccggccgaa
gccatgcgctgcgtgatggagagccaggcggcctccctgaaggcctcgctcccccattcg
gagctctccctgctggggcccaagctgctctcgtcccccctgtcctactcgcccatggct
ctctcgctgaagaagcctcctccctccccggcgcctctgccggaaccccctggcctgccg
gtggtgaagaaggaaggagaggacacccccatctcggacacgcccctgggaggagcctcc
tcctccttgtcctcctggagggactggggaaacatccaatcagatcgccgatggagcggg
gctctgctgatgacggacgacgcgttcaaccaagatgagaagccccctcgtctgcccgct
gtggcactgccgccctcctctctggacccctggaaggactgggcaggcggtggcggtgga
ggaggcggtagcggcagcggcggcggtggcgccgactccccgtacccgcagacgtccccc
cagaacagcccgctgccctcgtcctcctcctcgccgctgctggcgctcaataagccggcc
aaggcgcccgtgccgccgctcacccccgagcagtacgagctctacctgcaccaggacgtg
gacaccgtggagctcacgcagcaggtcaaggagcgcctggccaagaacggcatctgccag
cgcatgttcggcgagaaggtgcttggcctgtctcaggggagtgtgagtgacatgctgtct
cggccgaagccgtggagtaagctcactcagaagggccgagagcccttcatccgcatgcag
ctgtggctcaacacagagctgggccagggcctgctgcagctacagccacccacacacgag
atgacccccaagacgtcggccagctgcagcccggcgcccgagtccccggtgagctcggcc
gaggagtcggtgaagagccaggaccccggcgccgcgccccctccggcccccgcctcctcc
tccaccaccgcctccgagcagggcgaggcggccgagtcgcagcccggcacccccctcccg
ctgcccctgccgctgctgcccggcccgccgggcctcaccatccaggagatggtggccatg
tcccccgagctggacacctacgccatcaccaagaaggtcaaggaggtgctgaccgacaac
aacctcggccagcgtctgtttggtgagagcatcctgggcctgacccaggggtcggtgtcg
gacctgctggcgcggcccaagccctggcacaagctgagcctgaagggccgcgagcccttc
gtccgcatgcagctgtggctcagcgacccccgcaacgtggagaagctcatggacatgaag
cgcatggagaagaaagcctacatgaagcgtcgccacagctcagtgagtgaggtggtcccg
agcgacggcggcgtgtcgtccggggacttcggtccgtcctgcagtccccagcagcatctg
aagaagccgcgcgtggtgctcgccccagaggagaaggaggccctgaagcgcgcctaccag
cagaagccctacccctcgcccaagaccatcgaggagctggccagtcagctcaacctcaag
accagcaccgtcatcaactggttccacaactacaggtcccgtatccgccgcgagcttttc
atcgaggagatccaggcagcggcgggagaaggtgcggcgcgcgcggccgagggcgagagc
agctgcgacggcaccgagtccgacagcggcggcggcggaggtggcagcggcagcgtgggc
gcggaagaccggggcaggagcctctccagcagccccaagcccaaccaccatcaccaccac
caccaccatcaccaccaccactcgcaagcccacctctcggaggacgccctcaccaccacg
ccggggaccagcgacagctccaagtccggcgggatggagagtctgttcggcggggccatc
gccaccaccgtggccgcctccgccaccgccacggccgacaagaacccaaaggacagcagc
gtgcggcggcggaaagcggccaacctcaataacatcatccaccggctggagaaggccgcc
aaccgcgacgagctgggtaacgagtgggagttctga
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integrated database retrieval system
