Sardina pilchardus (sardine): 134080562
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Entry
134080562 CDS
T10667
Name
(RefSeq) integrin beta-7-like isoform X1
KO
K06590
integrin beta 7
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04510
Focal adhesion
spil04512
ECM-receptor interaction
spil04514
Cell adhesion molecules
spil04672
Intestinal immune network for IgA production
spil04810
Regulation of actin cytoskeleton
spil04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134080562
04514 Cell adhesion molecules
134080562
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134080562
09142 Cell motility
04820 Cytoskeleton in muscle cells
134080562
04810 Regulation of actin cytoskeleton
134080562
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
134080562
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spil04147
]
134080562
04515 Cell adhesion molecules [BR:
spil04515
]
134080562
Exosome [BR:
spil04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
134080562
Cell adhesion molecules [BR:
spil04515
]
Integrins
Integrin beta subunits
134080562
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
PSI_integrin
EGF_Teneurin
I-EGF_1
EGF_integrin
EGF_TEN
EGF_2
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
134080562
NCBI-ProteinID:
XP_062393061
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All DBs
Position
5:25282082..25296331
Genome browser
AA seq
768 aa
AA seq
DB search
MQQTWFMVIVILCCLGQNDTLDVRQTCQPQASCSECLRSPGCAWCKQGDFLKPGESNERR
CDSAESLTSRKCEVGHVINPKPWKDILKDSQLSSDPKNVVQMKPQSVQLKLRIGQPHELK
VVFKRAQGYPIDLYYLMDLSYSMKDDLDKIKNLGHDILTTLQNFTKDTHIGFGSFVDKVA
LPYVSQQILRLTNPCPSRMDQLHCRPAFSFRNILPLTEDADKFQKEVSKQKISANLDSPE
AGLDAIMQAAVCWEKIGWRPKVTRILVYTSDDTFHMAGDGRLAGIYSPHDGQCHLENSVY
QGTLQDYPSIGHLSTVLQNSSIQLIFAVTEEIYHAYKALSELIPGSVVGVLKNDSSNVVE
LISDAYRNLSASIVFDHEAAPAGLSISYQSSCGRGGWSDWSPHGECNGIKLDQQVEFTVR
FNATACLTKREPIKIKVQGTDADFTVLVETLCDCECKDKQEKSSDCSGNGTFHCGMCSCD
VKHLGQKCECQLSDDFESMKEMSALCRQTNSSDICGGHGLCECGKCACHNHYRGDYCECD
DNSCPQHLHKMCNGKGSCSCGQCQCNDDYTGEKCHCPPEGKRNCRKGKMGGKPCSGHGEC
PCDRCICKEGLTGDYCDRVQEPCGMKYQSCMMCAAQGQTCETECQDLRAVRDEGAQEYAC
IHEGLTFYVDATNDGPIEIHYADLPSKNHKNIFESIDKTSVIIGSSVTGIVVIGIVIIIV
YRLLIELYDLKEYRSFVRAQEMTDWKDTHNPLFQGATTTVMNPLHDDE
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagacatggttcatggtgattgttattctctgttgcttgggacagaatgacaca
ctggatgttcggcagacttgccaaccacaggcgtcatgctcagagtgtttgaggagtcct
ggctgtgcgtggtgtaaacagggggacttcctcaagcctggagagtcaaacgaacggcga
tgtgattcggccgagtcactgactagcaggaaatgcgaagtagggcatgtgatcaaccct
aaaccatggaaggacatcctaaaggactcgcagctgagcagtgatccaaaaaatgttgtg
cagatgaaaccacagtccgttcagctcaaactgcggataggtcagcctcatgagcttaaa
gtggtgttcaagcgtgctcagggctacccaatagacctgtactacctgatggacctcagc
tactccatgaaggatgatctggacaaaatcaagaatttgggacacgacatcctcaccact
ctacagaatttcaccaaagacacgcacatagggtttggttcatttgtggataaggtggcg
ctgccgtatgtgagccagcagatcttgcgactgaccaacccatgtcccagtcgcatggac
cagttgcattgtcggccagccttcagcttccggaacattcttcctctgaccgaagacgca
gataagttccagaaggaggtgagcaagcagaagatctccgctaacctggactcgccggag
gctggactggacgctatcatgcaagctgccgtctgctgggagaagattggatggagaccc
aaggtcaccagaattctagtctacacgtccgatgacaccttccacatggcgggagacgga
cgactggctggaatctacagcccccatgatgggcagtgccacctggaaaactctgtctat
cagggcacgcttcaggactatccttctataggccatctctcaacggttcttcagaatagc
agtattcagctcatctttgctgtgactgaggagatctaccatgcctacaaggcactgagt
gagctgatccctggctccgtagtgggggtgctgaagaacgactccagcaatgtggtggag
ctcatctcagatgcatacagaaatctgtccgctagcatagtgtttgaccatgaggcggcc
cctgcaggcttgtccatctcctaccagtcatcctgtgggagaggggggtggagtgactgg
agtccccacggggagtgcaatggaatcaaactggaccagcaggtggagttcaccgtgcgt
ttcaatgccacagcctgcctaacaaagagagagccgataaagatcaaagtgcagggcact
gatgccgacttcaccgtcctggtggagaccctctgtgactgtgaatgcaaggacaagcag
gagaaatcctctgactgcagcggcaacggaacgttccactgtggaatgtgcagctgtgac
gtcaagcaccttgggcagaagtgcgagtgtcagctgagcgatgactttgagtccatgaag
gagatgtctgcgctctgtcgccagaccaactcctcagacatctgcgggggccacgggctc
tgcgagtgtgggaagtgtgcctgccataaccattaccgtggcgattactgtgaatgtgac
gataacagctgtcctcagcacctccacaaaatgtgcaacgggaagggatcctgtagctgt
ggccaatgtcagtgcaatgacgactacactggtgaaaagtgtcactgtcctcctgaggga
aaacggaactgtaggaaaggcaagatgggcggcaagccatgcagtggacacggcgagtgt
ccttgtgaccgctgcatctgtaaagagggactgactggggattactgtgacagggtccaa
gaaccatgtggcatgaaatatcagagctgcatgatgtgtgcggcacagggtcagacatgt
gagacagagtgtcaggatctgagagcagtgcgggatgagggtgcacaggagtatgcctgt
attcacgagggactcaccttctacgttgacgccacaaacgatggacccatcgagatacac
tacgcagacctgcccagtaagaaccacaagaacatttttgagtctatagataagacctcg
gtcatcatcgggagttccgtaacgggcatcgtggtgatcggtattgtgataatcatcgtg
taccggctactgatcgagctgtacgacctgaaagaataccgcagctttgtgcgtgcccag
gagatgactgactggaaagatacccacaatccactcttccagggagcgacaaccactgtt
atgaacccattacatgacgacgagtaa
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