Sardina pilchardus (sardine): 134080600
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Entry
134080600 CDS
T10667
Symbol
lhx1b
Name
(RefSeq) LIM/homeobox protein Lhx1b
KO
K09372
LIM homeobox protein 1
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spil03000
]
134080600 (lhx1b)
Transcription factors [BR:
spil03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
134080600 (lhx1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Orbi_VP3
Motif
Other DBs
NCBI-GeneID:
134080600
NCBI-ProteinID:
XP_062393104
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All DBs
Position
5:complement(26631699..26636341)
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AA seq
405 aa
AA seq
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MVHCAGCERPILDRFLLNVLDRAWHAKCVQCCECKCNLTEKCFSREGRLYCKNDFFRRYG
TKCGGCAQGILPNDLVRKARNKVFHLNCFTCIICNKQLSTGEELYILDDYKFMCKEDYLS
SSIGKDTTLLSVTTCSDPSLSPDSQDPQDDGKDSEIGHLSDKEPCNNENEEQNTGTKRRG
PRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQLS
ALSTRRHLFFRSPRRMRTLMDRLEPGELMPNAHFSYGDYQGEYYGPGANYDYFPQGPPSS
QAQTPGELGYAPSSVPAGTPLGSLGEHHHPGHHPAGDVPCYTDIITQQHARDSPSPEPSG
PASMQSISSEMCGPGTPFTSLSLNGSGYSNQLSHTSSEMSEGTVW
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggtgcattgtgcggggtgcgagaggcctatcctggaccgatttttactcaacgttctg
gacagagcttggcacgccaaatgcgtacagtgttgtgaatgtaaatgcaatttaactgag
aaatgcttctctagagaagggagactctactgcaagaatgatttctttaggaggtatgga
accaaatgcggaggttgtgcacaaggaatcttgcccaacgatttggttcgcaaagcaagg
aacaaagtttttcacttgaactgtttcacctgcataatttgcaacaagcagctttcaact
ggcgaagaattgtatatcttagatgattataaattcatgtgtaaagaagactacttgagt
agtagcatcggcaaagacaccacccttctctcagttacgacatgtagtgacccaagtcta
tccccagactcacaggatccacaggacgacggaaaagactctgaaattggacatttatca
gacaaggaaccctgcaacaatgagaatgaggaacagaacacggggacaaaacgacgaggg
ccacgaaccaccatcaaagcaaaacagctcgagaccctgaaagctgcgtttgcagccaca
ccaaagcccaccaggcacatccgtgagcagctcgcgcaggaaactggactcaatatgaga
gtgattcaggtttggttccagaataggagatcaaaagaacgacgaatgaagcagctaagt
gctttgagtaccaggaggcatctttttttccgcagtccaagaaggatgcggacgctgatg
gaccggctagagcctggtgaactcatgccgaacgcgcatttctcctacggagattatcaa
ggtgagtactacggcccaggggctaactacgactacttccctcagggccccccttcgtca
caggcgcagaccccgggggagctgggctacgctccctcctcggtgccagcgggcaccccc
ctggggagcctgggggagcaccaccaccccgggcaccacccggcgggcgacgtgccgtgc
tacacggacatcatcacgcagcagcacgccagggactcgcccagcccggagcccagcggc
ccggcctccatgcagagcatctccagcgagatgtgtggccccggcacgcccttcacgtcg
ctgtccctcaacggcagtggctacagcaaccagctctcgcacacgtcctcagagatgagt
gaaggcacggtctggtag
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