Sardina pilchardus (sardine): 134080604
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Entry
134080604 CDS
T10667
Name
(RefSeq) transcription factor Sox-19a-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spil03000
]
134080604
Transcription factors [BR:
spil03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
134080604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
134080604
NCBI-ProteinID:
XP_062393109
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Position
5:complement(26776509..26779140)
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AA seq
297 aa
AA seq
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MYSMMEHDLKSSVQSHQTGPGMPPVNGPMHGLSNGGSKQGAANQATVDPMDKIKRPMNAF
MVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRALHMKEYPDY
KYKPRRKTKAVLKKDNPAAKYPLSAGNLLAAAAVQGPGGSPRMDSYGWGHTGGYGGMQSD
ALGYGQQPYRYDLSALQYPSAMTTAQTYMNGGNSYSPMSYGGNPQQPSPVMSMVKPESVS
HSPTGAPNHQRGPLQGDLRDMISMYIPNGDASDAGVQRGYPNLQQHYVGGTPPLTHI
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatggagcacgacttgaagtcctcggtgcagtcccaccagacaggccca
gggatgccacctgtgaacgggcccatgcacgggctcagcaacggggggagcaaacaagga
gcggccaaccaggccaccgtggaccccatggacaagatcaagcggcccatgaacgccttc
atggtctggtccaggggccagcggcgcaagatggcccaggagaaccccaagatgcacaac
tcggagatcagcaagcgcctgggcgccgagtggaagctgctgaccgacgccgagaagcgg
ccgttcatcgacgaggccaagcggctgcgcgcgctccacatgaaggagtaccccgactac
aagtacaagccccgccgcaagaccaaggccgtgctcaagaaggacaaccccgccgccaag
tacccgctgtcggccggcaacctgttggccgcggcggccgtccagggccccgggggaagc
cccaggatggacagctacggctggggccacacgggagggtacgggggcatgcagagcgac
gcgcttgggtacggccagcagccgtaccgctatgacctctcggccctgcagtacccgtca
gcgatgaccaccgcgcagacgtacatgaacggcggcaactcctacagccccatgtcctat
ggcggcaacccccagcagcccagcccagtgatgtctatggtgaagcctgagtccgtgtca
cattccccaactggcgccccaaaccaccagcgggggcccctgcaaggggacttgagggac
atgatcagcatgtacatcccaaacggggacgccagcgacgccggcgtccagaggggctat
cccaacctccagcagcactacgtggggggaacgccacccctcacacacatctga
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