Sardina pilchardus (sardine): 134080636
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Entry
134080636 CDS
T10667
Symbol
cadm1a
Name
(RefSeq) cell adhesion molecule 1a isoform X1
KO
K06781
cell adhesion molecule 1
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
134080636 (cadm1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
spil04515
]
134080636 (cadm1a)
Cell adhesion molecules [BR:
spil04515
]
Immunoglobulin superfamily
Nectin family
134080636 (cadm1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set_2
V-set
C1-set
Ig_5
Syndecan
Motif
Other DBs
NCBI-GeneID:
134080636
NCBI-ProteinID:
XP_062393154
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All DBs
Position
5:27493567..27608250
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AA seq
437 aa
AA seq
DB search
MAYGYISSLLLCTTLSAVLLTGAAQFIAVQSQNLMTDSVSVVEGETAIISCRVKNNDDSV
IQLLNPNRQTIYFRDMRPLKDARFQLVNFSDNELRVALNNVSLSDEGRYVCQLYTDPPQE
AYADVTVLVPPGNPIIEGQEEPVTEGNETEMTCTAASSKPAAKIRWMKGDQELTGTSQVE
PTYDNMYTVSSRLRVTVTREDDGVAVRCIVEHPAVKDFQAQKLLEVQYKPEVKIVVEYPH
GLTREGETLELTCVTRGKPVPDRVNWVKVDDDFPTHAVIAGSELLIENLNKSYNGTYRCV
ATNKIGESYDDYILYVYDAPTTPPPPSTAPPTTISTTPFPDSTQESVPSSDPALHDSRAG
EGVQRSVDHAVIGGVVAVVMFAILCALIVLGRYFARHKGTYFTHEAKGADDAADADTAII
NAEGGVSNSDEKKEYYI
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcttacggatatatctccagtctccttctgtgcaccaccttgtcggccgttctgttg
acaggtgctgcccagttcatcgcagtccagagtcagaacctgatgactgacagtgtgtcg
gtggtggagggggagacggccatcatcagctgcagggtgaagaacaacgacgactccgtc
atccagctgctcaaccccaacagacagaccatctacttcagggacatgagacccttgaaa
gacgccaggttccagctggtgaacttctctgacaacgagctgcgcgtggccctgaacaac
gtgtccctctcagacgagggccgctacgtctgccagctctacacggaccctccgcaagag
gcctacgcagacgtcactgtgctggttccacctggtaaccccatcattgagggtcaggaa
gagccggtaaccgagggcaacgagacggagatgacctgcactgcagccagcagcaaacca
gccgccaagatccgctggatgaagggagaccaggagctgaccgggacgtcccaggtggag
cctacctatgacaacatgtacacggtcagcagccgtctccgggtaaccgtaaccagggag
gatgatggggttgctgtgcgatgtattgtcgagcatccagcagtcaaagactttcaggcg
cagaagttgctggaagtccagtataagcccgaggtgaagatcgtagtggagtacccacat
ggtctgaccagagagggcgagaccctagaactcacctgcgtaacccgaggcaaacctgta
ccagaccgggtgaactgggtaaaggtggacgatgactttcccacacatgcagtcatagcc
ggttccgagctgctcatcgagaacctcaacaaatcctacaacggaacgtacagatgcgta
gcaaccaacaagatcggcgaatcatatgacgactacattctatatgtgtatgacgctccg
accacaccccctcccccaagcaccgcccctcccaccaccatcagcaccacccccttccca
gactccacccaagaatctgtgccaagttctgatcctgcattacacgactccagagcaggc
gagggtgtgcagcggtcagtggaccatgcggtcatcggcggcgtggttgccgtggtgatg
tttgccatcctctgtgctctcatcgtcctcggcagatacttcgcccgacacaaaggtacc
tacttcacccatgaagctaaaggagctgatgacgcggcagacgccgacacggccatcatc
aacgccgagggcggagtcagcaactcggacgagaagaaggagtactacatctga
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