Sardina pilchardus (sardine): 134080654
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Entry
134080654 CDS
T10667
Symbol
cltca
Name
(RefSeq) clathrin, heavy chain a (Hc) isoform X1
KO
K04646
clathrin heavy chain
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04142
Lysosome
spil04144
Endocytosis
spil05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
134080654 (cltca)
04142 Lysosome
134080654 (cltca)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
134080654 (cltca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spil04131
]
134080654 (cltca)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spil04147
]
134080654 (cltca)
Membrane trafficking [BR:
spil04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
134080654 (cltca)
Exosome [BR:
spil04147
]
Exosomal proteins
Proteins found in most exosomes
134080654 (cltca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
134080654
NCBI-ProteinID:
XP_062393190
LinkDB
All DBs
Position
5:30108825..30148270
Genome browser
AA seq
1687 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDLADPNN
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNNLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQFPKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFAQMLVQDE
EPLADITQIVDVFMEYNLVQQCTSFLLDALKNNRPTEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLTELFESFKSFEGLFYFLGSIVN
FSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRKDPELWASVL
LETNPFRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYMEV
VQAADKSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGTEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLESALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAILTMMS
HPTDAWKEGQFKDIVTKVANVELYYKAVQFYLEFKPLLLNDLLIVLSPRLDHSRAVNFFS
KVKQLPLVKPYLRSVQNHNNKSVNEALNNLFITEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDIELAEELLQWFLEE
DKKECFAACLFSCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDFVMEKVDKL
ETSESLRKEEEQATETQPIVYGTPQLMLTAGPSVPVPPQQAYGYGYTGAPAGYPQQPPPA
AGFGYGM
NT seq
5064 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatcctgcctatccgattccaggagcacctgcagctccaaaatttggggata
aatccggccaacattggcttcagcacgctgacgatggagtcagacaagttcatctgcatc
cgtgagaaggtgggcgagcaggcccaggtggtcatcattgacctggccgaccccaacaac
cccattcgcaggcccatctccgccgacagcgccatcatgaatcccgccagcaaagtcatc
gcccttaaagctgccaaaacccttcagatctttaacatcgagatgaagagcaagatgaag
gcccacaccatgactgatgatgtcaccttctggaagtggatctccctcaacaccgttgct
ctggtgactgacaatgccgtgtaccattggagcatggagggcgactcgcagccagtcaaa
gtgttcgaccggcactcaagcctggccggctgccagatcatcaactaccgcaccgacgcc
aagcagaaatggctgctcctcatcggcatctcagcccagcaaaaccgtgtggtgggggcc
atgcagctgtactctgtggacaggaaggtgtcccagcccatcgagggccacgcagccagc
ttcgcccagttcaagatggagggcaatgccgaggagtccacgctcttctgctttgccgtc
aggggccaggcaggaggaaagctgcacatcattgaggtgggcaccccgcccacgggcaac
cagccgtttcccaagaaggcggtggacgtgttcttccctccagaagcccagaatgacttt
ccagtggccatgcagatcagctccaaacaggatgtggttttcctcatcaccaagtacggc
tacatccacctgtacgacctggagactggcacctgcatctacatgaaccgcatcagcgga
gagaccatattcgtgaccgccccgcacgaagccaccgccggcatcatcggcgtcaacagg
aaaggacaggttctgtctgtgtgtgtggaagaggagaacatcatcccctatatcaccaac
gtgctgcagaaccctgacctggccctccgcatggccgtccgcaacaacctggccggtgcc
gaggagctcttcgcccgcaagttcaacaacctgtttgcggcaggaaactactccgaggcc
gccaaggtggccgccaacgctcccaagggcatcctgcgcactccagacaccatccggcgc
ttccagagtgtcccggcgcagcccggccagacctcgccgctgctccagtactttgggatc
ctgctggatcagggccagctcaacaagtttgagtccctggagctgtgcaggcccgtgctg
cagcagggacgcaagcagctgctcgagaaatggctcaaggaggataagctggagtgctct
gaggagctgggagacctggtgaagtctgtggaccccaccctcgccctcagcgtctacctg
agggccaacgtccccaacaaggtcatccagtgcttcgccgagaccggccagttccccaaa
atcgtcctgtacgccaagaaggttggctacactccagactggatctttctgctgaggaac
gtgatgcgcatcagccctgagcagggcctgcagtttgcccagatgctggtgcaggacgag
gagcccctggccgacatcacacagattgtagatgtgttcatggagtacaacctggttcag
cagtgcacttcattcctactggacgcacttaagaataacaggcccactgagggccccctc
cagacccgcctgctggagatgaacctgatgcacgcgccacaggtagccgacgccattctg
ggcaaccagatgttcacccactacgacagggcgcacgtggcccagctctgcgaaaaggcc
ggcctcctccagagggcactagagcactacacagacctgtacgacatcaagcgcgctgtg
gtccacacacacctgctcaacccagagtggcttgtgaacttctttggctcgctgtcagtg
gaggactctctggagtgcctgagggccatgctgtcggccaacatccgccagaacctgcag
atctgcgtgcaggtggcctccaagtaccacgagcagctctccacccagagcctcaccgag
ctcttcgagtccttcaagagctttgagggtctcttctatttcctgggctccattgtgaac
ttcagtcaggaccccgaagtgcacttcaagtacatccaggctgcctgcaagaccggccag
atcaaggaggtggagcgcatctgcagggagagcaactgctatgaccctgagcgcgtcaag
aacttcctcaaggaagccaaactgacagaccagctgccactcatcatcgtgtgcgaccgc
ttcgactttgtgcacgacctggtcctctacttgtaccgcaacaacctgcagaagtacatc
gagatctacgtgcagaaggtgaaccccagccgtctgccagtggtgattggtggcctgctg
gacgtggactgctccgaggacgtgatcaagaacctgatcctggtggtgcggggacagttc
tctactgatgagctggtggcagaggtggagaagaggaacaggctgaagctcctcttgccc
tggctggaggctcgtatccatgagggctgtgaggagccagccacacacaacgccctggct
aagatctacatcgacagcaacaacaacccggagcgcttcctgcgcgagaacccctactat
gacagccgcgtggtgggcaagtactgcgagaagagggacccccacctggcctgtgtggcc
tatgagagaggacagtgcgaccaggagctcatcaatgtctgcaatgagaactccctcttc
aagagtctgtcccgctacctggtccgcaggaaggaccctgagctctgggccagcgttctg
ctcgagaccaacccattcaggagacccctcattgaccaggtggtgcagacggctctctct
gagacccaggaccccgaggaggtgtccgtcacagtcaaggccttcatgaccgctgacctg
cccaatgaactcattgaactcctggagaagattgtgttggacaactctgtattcagtgaa
cacagaaaccttcagaatctgctgatcctgacagccatcaaagcagaccgcacccgcgtc
atggagtacatcaaccgcctggacaactatgacgccccagacatcgcgaacatcgccatc
agcaacgagctcttcgaggaggccttcgccatcttcaagaagttcgacgtcaacacctcc
gccgtgcaggtcctgattgagcatatcggtaacctggaccgggcgtacgagtttgctgag
cgctgcaatgagccagctgtgtggagtcagcttgccaaagcccagctgcagaagggcctg
gtgaaggaggccatcgactcctacatcaaggccgacgacccctccgcctacatggaggtg
gtccaggccgcagacaagagcggtaactgggaggacctggtgaagttcctgcagatggcc
cgtaagaaggcccgtgagtcctacgtggagacagaactcatcttcgccctggctaagacc
aaccggctggctgagctggaggagttcatcaatggaccaaacaacgcccacatccaacag
gttggcgaccgttgttatgatgagaagatgtacgacgctgcaaagctgttgtacaacaac
gtgtccaactttggacgtctggcctccaccctggtgcacctcggagagtaccaggcagct
gtggacggagcccgcaaggccaacagcacacgcacctggaaggaggtgtgctttgcctgt
gtggatgggacagaattccggctggctcagatgtgtggcctccacatcgtggtccatgca
gatgagctggaggagctgatcaactattatcaggatcgcgggtactttgaggagttgatc
accatgctggagtcggccctgggcctggagcgtgcccacatgggcatgtttacagagctg
gccatcctctactccaaattcaagccgcagaagatgagggaacacctggagctcttctgg
tccagagtcaacattccaaaggtcctgagggctgcggagcaggcccacctctgggcagag
ctggtgttcctgtacgacaagtacgaggagtacgacaacgccatcctcaccatgatgagc
caccccacagacgcctggaaagagggccagttcaaagatatcgtcaccaaggtggccaat
gttgagctttactacaaagcagttcagttctacttggagtttaagcctttgttactgaat
gacctgctcattgtgctgtccccgagactggaccactcccgagcagtcaacttcttcagc
aaggtgaagcagttgcctctagtcaaaccatacctgaggtcagtacagaaccacaacaac
aaatctgtcaatgaagcactcaacaacctcttcatcactgaggaagattaccaggctctg
aggacgtccatagacgcctatgacaactttgacaacatctccctggcccagcggctggag
aaacacgagctgatcgagttcaggagaatcgctgcctacctctttaagggcaacaaccgc
tggaaacagagtgtggagctctgcaagaaagataaactttacaaggatgccatgcagtac
gcgtccgagtccaaggacattgagctggcggaggagctgctgcagtggttcctggaggag
gacaagaaggagtgcttcgccgcttgcctcttctcctgctacgacctgctgcggcccgac
gtggtgctggagaccgcctggaggcacaacatcatggacttctccatgccctacttcatc
caggtcatgagggagtacctctccaaggtcgatttcgtaatggaaaaggtggacaagctg
gagacctctgaatcgctcaggaaagaggaggaacaggccaccgaaacacagccaattgtt
tatggcacaccgcagctgatgctgaccgcaggacccagcgtgcccgtcccccctcagcag
gcctacggctacggctacacgggagcgccggccggctacccccagcaaccccccccagct
gctggcttcggctacggcatgtaa
DBGET
integrated database retrieval system
