Sardina pilchardus (sardine): 134080658
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Entry
134080658 CDS
T10667
Symbol
rnft1
Name
(RefSeq) E3 ubiquitin-protein ligase RNFT1 isoform X1
KO
K22379
E3 ubiquitin-protein ligase RNFT1 [EC:
2.3.2.27
]
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spil04121
]
134080658 (rnft1)
Enzymes [BR:
spil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134080658 (rnft1)
Ubiquitin system [BR:
spil04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134080658 (rnft1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-rbx1
zf-C3HC4_4
Prok-RING_4
zf-ANAPC11
zf-RING_6
zf-Nse
RING_XB3-XBAT31
zf-RING_4
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
134080658
NCBI-ProteinID:
XP_062393196
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All DBs
Position
5:complement(30239903..30245082)
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AA seq
424 aa
AA seq
DB search
MILRTQHDRRNSYENRRALKLRESPIVMQTNSSETHTPSGNGLSLTLQPERLPRTPNTDG
SFNTSEPDDVRVSMTGSSTGPSGRHASRRARASSHSHSHSHGHSRPHPQPEPENESIDSD
LENGEPSTSFSEFRYLFRWIQKSLPFIIILCAKLIIQHALGLAVGVGLFTTFVYVNTNIQ
TQVFLQDRRSKFQCVWLLLFLLSSTLLLYYTFLSDALYYCLIFMSPSIEPLGFWEVLWAV
GVTNFVAKFLFMGLKCLILLLPTSVAAYRTQGKWFMMTEEVGQVYQTLVPLPAWFRYLVT
YQEEDGRTGLTLGILLALVYLILKLLGLYGQWGSLQKTITIFLSNENSGVAATKTQCADA
GDVCPICRAEYREPRVLLCQHIFCEECIALWLNQDKTCPLCRTVITDKVHKWKTGATSAY
LQIY
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgatactccggactcagcatgacagaagaaattcgtacgagaaccgaagagcgttgaaa
ctgagggaatctccaattgtaatgcagactaattcatcagagacacacactccttcagga
aatggcttatccctaacactgcaaccagagcgactcccgaggacacccaacacggatggt
tctttcaacacgtcggaaccagatgatgtccgtgtctccatgactggatcatcgacagga
cctagcgggagacatgcatcgcgcagagcccgagcaagttctcacagtcactcgcattcc
catggacacagccgcccccatcctcaacccgaacccgagaacgaatctatcgattccgac
ttggagaatggagagccgagcacatcgttctctgaatttcgttacctctttcgctggatt
caaaaaagtcttccgttcataatcatcctctgtgctaagcttataattcaacatgcattg
gggcttgccgttggagttggcttgtttacaacttttgtgtatgtaaacacaaatattcag
acccaagtgtttctccaggatcgacgttcaaagtttcagtgtgtttggctcttgctgttc
ctgctctcttccacactcctactatactacaccttcctcagcgatgcactttactactgt
ctcatttttatgagccccagtatcgagcccttgggcttctgggaagtcttatgggctgtc
ggggtgaccaactttgttgcaaagttcctcttcatgggattaaagtgccttattctcctg
ctccccacctctgtggctgcatacaggactcaggggaaatggtttatgatgactgaggag
gttgggcaggtgtaccagacattggtgcccctgccagcttggtttcgctacctggtgacc
taccaggaggaggatggtcgcactggcctgaccctgggtatcctgctcgctttggtctac
ctcatactgaagcttttgggactttatggacaatggggttctcttcagaaaacaatcact
atctttctcagcaatgagaatagtggcgttgccgccaccaagactcagtgtgctgacgca
ggggatgtgtgccctatatgtcgggcagagtacagggagccacgagtcctcctgtgtcag
catatcttctgcgaggagtgcattgctttgtggttgaaccaggacaagacgtgccccctc
tgcaggacggtcatcacggacaaagtccacaagtggaaaactggtgccacctcagcttac
ttacaaatatactga
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