Sardina pilchardus (sardine): 134080683
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Entry
134080683 CDS
T10667
Symbol
cnot8
Name
(RefSeq) CCR4-NOT transcription complex subunit 8
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134080683 (cnot8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spil03019
]
134080683 (cnot8)
Messenger RNA biogenesis [BR:
spil03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
134080683 (cnot8)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
134080683 (cnot8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Trimer_CC
EKR
Motif
Other DBs
NCBI-GeneID:
134080683
NCBI-ProteinID:
XP_062393227
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All DBs
Position
5:complement(31447993..31458466)
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AA seq
285 aa
AA seq
DB search
MPAALADTSQIICEVWASNVEEEMRKIRQIVQNYNFIAMDTEFPGVVVRPIGEFRSTVDY
QYQLLRCNVDLLKIIQLGLTFMNEDGDYPQGTTTWQFNFKFNLTEDMYSQDSIDLLQNSG
LQFKKHEEEGIDTLYFAELLMTSGLVLCENVKWLSFHSGYDFGYLVKLLTDSRLPEEEHE
FFHILNLFFPAIYDVKYLMKSCKNLKGGLQEVADQLELKRIGRQHQAGSDSLLTGMAFFR
MKELFFEDNIDDAKYCGRLYGLGSGSTQNQNGISNSSQEESNNKH
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgctctagcggataccagccaaatcatctgtgaagtatgggccagcaacgtt
gaagaggagatgaggaaaatccgacagatcgttcagaactacaacttcattgccatggac
acagaatttcctggcgtggttgtcagaccgatcggagagtttcggagcactgtggactat
caatatcagctcctgcgatgtaatgtcgacttactgaagatcattcaactcggcctcaca
tttatgaatgaagatggagactacccccaagggacaacaacgtggcagttcaacttcaag
ttcaatttaacagaggacatgtactcgcaggactccatagacctgctgcagaactctggg
ctgcagttcaagaagcatgaggaggaggggatcgacacactctacttcgccgagctgctg
atgacctcgggcctggtgctgtgtgagaacgtcaagtggctgtccttccacagtggctac
gacttcggctatctggtgaagctgctgacggactcgaggctgcccgaggaagagcacgag
ttcttccacatcctcaacctcttcttcccagccatctatgacgtcaagtacctcatgaag
agctgcaagaacctgaaggggggtcttcaggaggtggcggaccagttggagctgaagagg
atcggcaggcagcaccaggccggctcggactcgctgctcactgggatggccttcttccgc
atgaaagagttattctttgaagacaacatcgatgacgccaagtactgcggccgattgtat
gggctggggtccggctccacccaaaatcagaacggcatctcaaactcgtcccaggaagag
agcaataacaagcactga
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