Sardina pilchardus (sardine): 134080820
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Entry
134080820 CDS
T10667
Name
(RefSeq) GRB10-interacting GYF protein 1-like
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spil03019
]
134080820
Messenger RNA biogenesis [BR:
spil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
134080820
Surveillance factors
Other surveillance factors
134080820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
DUF5134
TRI4_N
DUF5643
Motif
Other DBs
NCBI-GeneID:
134080820
NCBI-ProteinID:
XP_062393414
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All DBs
Position
5:21691107..21715361
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AA seq
1118 aa
AA seq
DB search
MTAESLNFGPEWLRALSRGGSVTSPPASPAMPKSKLADYRYGREEMLALYIKDNKVPEQL
QDKEFAPVLQEQPLQPLALVPLTEEEQRNFSMSVNSSAVLRLMGKGGGAAPVGVARGRGT
VRGGRGRGRGEGAFYQRGPEEGEVGFGRSREMHRSQSWDDRGERRFEKPLRRDGVRVGFE
EGAVGARKDFSRSDSDNWRTLREEQDEEEAAAAAAAAATTTEPGGSWRTVGGRRDDGGPR
SAGWRDHVGEGRRKKFDFDFGDGAGGRRRAGSDGMDDDRDGLPEWCTDEEDNEMGTFDSS
GAFMCIKKSSRDTIPEDQELEFEALEDERGQERRESGGEGGEEAATATSAASAYQPFFKE
HEMLTVTEVEMMMPGPSSSSSSSSPPSMPAPPPSLSLLPLTNPEPAPPAAALPTNTTRDS
AEDAAPPGGIGQPGTGSSQSVSSPPASAAAGADLPPAGGDNEEEERMKHLQQEAEKMVAS
LQDTSLEEERFTQALQESHGVGAVGERVGSSAGGGSGPPHSHPHSHQAVAAAAAAAAAAS
STHPHGHSHSASSHGHSHPASALPLSHEAAMKWFYKDPQGEIQGPFSTVEMCEWFQAGYF
TMTLLVKRGCDEGFQPLGDVIKMWGRVPFSPGPSPPPLLSNMDQEVFKKQLEQVATAALY
QQQLQMRYQHINSNRCGESSMMPAMNRSMSVPDSGSLWDMHTSASQQSAGGEASLWDLTM
GNLPQGLTLEQLQQKLQQERREAELRVKREEEERKRREEKRRQQEEQKRREEEELFHRKQ
QCRQQQELIMKLLQQSQQQQQQQQPVGGGGGQSQGPCWNSAQSNPLAKPPKTPLNLLEME
AERLLKQQHRVQQQQPRDRQSHGGLTMGQWGDGGVGGMWGAGSLEGKASGGGSSGGSSGG
MGLWDEAVKNQSSHRSMSLKNSHSSPSLSEQYMLRRKHTEDEEKLLRLLQGMKPQQPQDG
FTTWSEQMLHALNTSANNSSSSQEVATIVAYLKEVESPYEVHDFIRAYLGDTVEAKEFAK
QFLERRAKQKANQQRQQQQQQQQQQLSKELSGLNMNFPLQSMFQASHSGKGGVYDTQASK
MKKKPNMMLHSDPSILGYSFLGAGERMILGEMETVEDY
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgactgcagagtctcttaacttcggtccagaatggctccgtgcactatctcgagggggg
agtgtgacgtctcctcctgcatcccccgccatgccaaagtccaagctggccgactaccgc
tacggccgagaggagatgctagcactttatatcaaagataataaggttccagagcagctg
caggataaggagtttgcgcccgtgttgcaggagcagccgctgcagcctctagccctggtg
cccctgacggaggaagagcagaggaacttttccatgtccgtgaacagctctgctgtgctg
aggctcatgggaaaagggggaggggctgcccctgtgggagtggcccgaggccgagggacc
gttcgaggaggaagaggaaggggaagaggagagggcgctttctaccaaagaggtccagaa
gaaggagaggtgggctttggccgcagcagagagatgcatcgcagccaaagctgggacgac
aggggcgagcggcgcttcgagaagcccctgcggagagacggggtgcgggtgggcttcgag
gagggcgccgtgggggcacgcaaggacttctcgcgctccgacagcgacaactggcgcacg
ctgagggaggagcaggacgaggaggaggccgccgcagctgccgccgccgccgccaccacc
actgagcccggaggaagctggaggaccgtggggggcagacgtgatgatggaggcccgcgc
tcggcagggtggcgtgaccacgtcggggagggccggcgcaagaagttcgactttgacttc
ggcgatggcgcgggcggtcgccggcgtgccggaagcgacggcatggacgacgaccgggac
ggcctcccggagtggtgcactgacgaggaggacaacgagatgggcaccttcgactcgtcc
ggagccttcatgtgcatcaagaagagctcgcgggacaccatccccgaggaccaggagctg
gagttcgaggccctggaggacgagaggggccaggagcggcgggagagcggcggggaggga
ggcgaggaggccgccaccgccacctccgccgcgtcggcctatcagccattcttcaaagag
catgaaatgctgactgtcaccgaggtggagatgatgatgcctggaccctcgtcttcctcc
tcctcttcctctcccccatccatgcctgctcctccaccctcgctgtctctgctccccctc
accaatcccgagcctgcccctcctgctgcagcactgcccacaaacaccacacgggattct
gctgaagatgcagcaccaccagggggcattggtcagccgggcaccggctcctctcagagc
gtctcgtctccccctgcttctgccgctgccggagcagacctcccaccagcaggtggcgac
aacgaggaggaggagcgcatgaagcacttgcagcaagaggcagagaagatggtggcgtcg
ctccaggacacctccctggaggaggagcgcttcacgcaggcgctgcaggagagccacggc
gtgggcgccgtcggagaaagagtgggatccagcgcggggggcgggtccgggcccccgcac
tcccaccctcacagccaccaggccgtggcggctgccgcagcagctgccgccgccgcttcc
tccacgcaccctcacggccactcccactcggcctcgtcgcacggccactcccatccggcc
agcgcgctcccgctctcgcacgaggccgccatgaagtggttctacaaagaccctcaagga
gagatccaaggcccgttctccacggtggagatgtgcgagtggttccaggcgggctacttc
accatgaccctgctggtgaagcggggctgcgacgagggcttccagcccctgggagacgtc
atcaagatgtgggggcgcgtgcctttctcccctgggccctcgccgccacccctgctgagc
aacatggaccaggaagtgtttaagaagcagctggagcaggtggccaccgctgccctgtac
cagcaacagctccagatgcgctaccagcatataaacagcaaccggtgtggggagtcgagc
atgatgccagctatgaacaggtccatgtcggtcccggacagcgggtccttgtgggatatg
catacctcagcttcacagcagtcagcaggcggtgaagccagtctgtgggacttaaccatg
ggcaacttacctcaggggctaactctggagcagctgcaacagaagcttcagcaggagcgt
cgtgaagctgaactcagggtaaagagggaggaggaggagaggaaacggagggaggagaag
aggaggcaacaggaggagcagaagaggagagaggaggaggagcttttccaccgcaaacag
cagtgtcgtcagcagcaggagctgatcatgaagctgctccagcagagccagcagcagcag
cagcagcagcagccggtggggggtggggggggccagtcccagggcccctgctggaactcg
gcccagtccaacccgctggccaagccccccaagacccccctcaacctgctggagatggag
gccgagaggctgctcaagcagcagcatagggtccagcagcagcagccgagagaccggcag
tcacatggtggtctgacgatgggccagtggggtgatggtggggttggggggatgtggggc
gcgggcagcctggagggcaaggccagtggagggggcagcagtggaggcagctctggggga
atgggcctgtgggacgaggctgtgaagaaccagagcagccaccgtagcatgagcctcaag
aacagccacagcagcccctcactcagcgagcagtacatgctgcggcggaagcacacggag
gacgaggagaagctgctgcgtctgctgcagggcatgaagccacagcagcctcaggacggc
ttcaccacctggagcgagcagatgctgcacgcgctcaacacctccgccaacaactcctcc
tcctctcaggaagtggccaccatcgtggcatatcttaaggaggtggagtcgccttacgag
gtgcacgacttcatccgcgcctacctgggggacacggtggaagccaaagagttcgccaag
cagttcctggagcgccgtgccaaacagaaagctaaccagcagaggcaacagcagcagcaa
cagcagcagcagcagctatcaaaggagctgtctggtctaaacatgaacttccctctgcag
tccatgttccaggcatcccattctgggaagggcggcgtgtacgacacccaggcgagcaag
atgaagaagaagcccaacatgatgctccactcggaccccagcattctcggctactcgttc
ttgggcgcaggggagcgaatgatcctgggcgagatggagaccgtggaggattactaa
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