Sardina pilchardus (sardine): 134082446
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Entry
134082446 CDS
T10667
Symbol
prpf31
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134082446 (prpf31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spil03041
]
134082446 (prpf31)
Spliceosome [BR:
spil03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
134082446 (prpf31)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
134082446
NCBI-ProteinID:
XP_062394157
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Position
6:3879734..3886805
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AA seq
512 aa
AA seq
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MSLADELLADLEEAGDEGEDGLYAGEEGRDSDGEVEESAVSAGLEDIPEEMELDYSGAES
VTSIAKLRHSKPFSEITEKIAEYVAKQQQTKEVSGPVESDPEYKLIVAANNLTVEIDNEL
NIIHKFVRDKYSKRFPELESLVPNALDYIRTVKELGNNLEKCKNNENLQQILTNATIMVV
SVTASTTQGVMLGDDELQRLEEACDMALELNQSKHRIYEYVESRMSFIAPNLSIIVGAST
AAKLMGVAGGLTNLSKMPACNLMLLGAQRKTLAGFSSTSLLPHTGYIYHCDVVQTLPPDL
RRKAARLVSAKCTLAARVDSFHESGVGKVGYDLKEEIERKFDKWQEPPPVKQVKPLPAPL
DGQRKKRGGRRYRKMKERLGLTEIRKNANRMTFAEIEDDAYQEDLGFSLGQLGKSGSGRV
RAAQVNDATKARISKSLQRTLQKQSMTYGGKSTVRDRSSGISSSVAFTPLQGLEIVNPGA
AEKKIAEANQKYFSNMAEFVKVKKEGESSVKP
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggctgacgaactgctcgctgacttggaagaagccggtgacgagggagaggat
ggactgtatgctggcgaggaaggtagagacagcgacggagaggtcgaagagagtgcggtt
tctgccggcctagaggatatcccggaggagatggagctggattacagtggggcagaaagt
gtcacatctattgcaaaattacgccacagtaaacctttttcagaaatcacggagaaaatt
gcagaatatgttgccaaacagcaacagaccaaggaagtgtctggacctgttgagtcagac
ccagagtacaagctgattgttgctgccaacaacctgacagtggaaatcgacaatgagctg
aatatcattcataagtttgtgcgtgacaagtactccaagcgattcccagagcttgagtct
ctggtcccaaacgcgctggactacatcaggaccgtaaaggaactgggcaacaacctggag
aagtgcaagaacaatgagaacctccagcagatcctcaccaacgcaaccatcatggtggtc
agtgtcacagcctccaccactcagggggtgatgctgggagacgatgagcttcagcgattg
gaggaggcctgcgacatggctctggagctgaaccaatcaaagcacagaatctacgagtac
gtggaatccaggatgtcgttcattgccccaaatctgtccatcatagttggggcgtcgacc
gcagctaaacttatgggtgttgctggtgggctgactaacctgtccaagatgccggcgtgt
aacctgatgctgttgggggcccagcggaagaccctagcaggcttcagcagcacctctctg
ctcccccacacaggctacatctaccactgcgacgtggtgcagacactcccaccggacctg
aggaggaaggcggctcgcctagtgtcggccaagtgcacgctggcagcacgggtggacagc
tttcacgagagcggagttggcaaggtgggttatgacctgaaagaggagattgagaggaag
tttgacaagtggcaggagcctcccccagtcaagcaggtgaagccgctccccgccccactg
gacggacagaggaagaagaggggaggcaggagataccgcaagatgaaggagcgtttgggc
ctgactgagatcaggaagaacgccaacagaatgacatttgctgagattgaggacgacgcc
taccaggaggatctgggcttcagcttggggcagctgggcaagtctggcagcgggagggtg
agggcagcacaggtcaacgacgccaccaaggccaggatctccaaatccctgcagagaact
ctgcagaagcagagcatgacgtatggagggaagtccacagtcagagacagatcctctgga
atcagctccagtgttgctttcacaccgctacaggggctggagattgtgaacccaggggct
gcggagaagaagatcgcggaggccaatcagaagtacttctccaacatggccgagttcgtc
aaggtcaagaaagagggggaaagcagcgtcaagccttga
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