Sardina pilchardus (sardine): 134082525
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Entry
134082525 CDS
T10667
Name
(RefSeq) DENN domain-containing protein 4B-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spil04131
]
134082525
Membrane trafficking [BR:
spil04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
134082525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
PPR
DUF2464
SPA
Motif
Other DBs
NCBI-GeneID:
134082525
NCBI-ProteinID:
XP_062394277
LinkDB
All DBs
Position
6:complement(8508303..8547854)
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AA seq
1508 aa
AA seq
DB search
MTEEKCPQLVDYFVVAGLVEGSTPMDDDGGGQQKGSGGGGVGGGRSVEPVTDVVVIARGL
GEDVPEGFTCIEKTLGGHPAELSAGLINNPHMFLCYRRGHDKPPIVELGVLYEGKDPSKS
GWEVIDHTPYGRSASLSTGSPTTHRTFLTYRRAPDSQALNTLGVTDISLLMPSKGEVAPH
TFCRVDKNLNTGMWGPALYLCYKRAVAKANALVYEAGLINRYPEEDLESFPLPDSVPMFC
LPMGVTVESWPLNTKYQLPVFSTFVLTSASGDKVYGAAIQFYEAYPREALAERQRVRLGL
VSVVDRRPITSRSVQVKKSVCVLSHWPFFTVFQKFLTFVYRYSISGPHVLPLEKHISSFM
HNVPFPSPQRPRILVQLSPYDNLLLCQPVSSPLPLSGASFLKLLQNLGPENACTLLLAVL
TEHKLLLHSLRPDVLTSVAEALVSMTFPLRWHCPYIPLCPLRLADVLCAPMPFIVGVHSS
YFDLYDPPSDVVCVDLDTNTIFQLEDKKPLSWRSLPRKHGKMLLNSLTNLNKTLEKICTP
GQEDATLEFLLTDYDLIYGRQKQLELEIQEAFLRFMSCLLRGYRTYLLPITQAPSDRTTD
CSSLFNLQGFLKSRDRTQQKFYNQLTRTQMFTQFIEECSFVSDRHASLEFFDECVQKVDV
EKPEEVHLVDLDETHSGEHTVFIMPPEEPQEADGSECQAHYSYETFPVLQPELFDRPQDQ
LRVPTKGSAPSSPAPRRTKQEIKLAQKKAQKYSAVPDMWSKCLLGHCYGLWFIYLPTFVR
AESTKVRTLHTAYEVLKHMETRKVVLPDEVCYRILMQLCGQYGQPVLAVRVLLEMKKAGI
TPNTITYGYYNKAVLESKWPSTSHGGRLRWAKLRNVVMAVAQFRQPIKHRQKSDSVSSRS
DVIFSKPRPHSALVRQNSWSGLSESSSHESLNSLLPKSNSLSSMRSSTDPEVKLTRKALL
RNSGGADDPVSARKPPAGPPEVPAGLPPSGVLVKRSQVCLSTFYKDYAETPETHPDCRCQ
PGERESRSTDARDSLSRKTLDENYNHVASPSRGLAGKLQQLLTPTRHRAFVRRAASVDER
RPGGGSGSGSGSKAAERRQARKAQVTETFLRAKERLVNATSESSLSVGSDIDLTDTPPGL
NFPLRKSWDPTPEGAGLEVLMSSCSLCRSCNSLVYDEEIMAGWTSDDSNLNSSCPFCSAT
FVPLLNAEICDLGPVSSSERSTLNAEDEVESAMRPPGGQEGSERPLPNGLSDDSSSETSC
YSESSSSNTTSGLSVGGPPLVTVAYLSPLVLRKELESLLENEGEAVLSQPQLLDSHSIIF
WNLVWYFQRLGLPSNLLQLVRSSQLAAHITQSIENPAVRVRLLWDTLTPDTDFWPPLYVL
WRIHSGVRMLRNHSWRRHNHPFTLSFLEEVLRWVGMNEVHKAVTLLLDTIAKQPGNPRIQ
RSLYREILFLTLAAMGKDHVAAFDKKYKTAYSRLSGSLGRDELRRKRGQPPSPKAVDCRR
CFLYPLEC
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atgactgaggagaaatgccctcagctggtggactattttgtggtggcgggcctggtggag
ggctccacccccatggacgacgatggaggcgggcagcagaagggcagcggcggcggcgga
gtaggaggaggccgctcggtggagccggtgacggacgtggtggtgatcgcgcgggggctg
ggcgaggacgtgcccgaaggcttcacctgcatcgagaagacgctgggggggcacccggcc
gagctgagcgccggcctcatcaacaacccacacatgttcctctgctaccgccgcggccac
gacaagccccccatcgtggagctgggagtactgtatgagggcaaggacccctccaagtct
ggctgggaggtgatcgaccacacgccgtacggccgctcggccagcctgagcacggggagc
cccaccacccaccgcacgttcctcacgtaccgccgggcgccggactcgcaggcgctgaac
acgctgggcgtcaccgacatctcgttgctcatgcccagcaaaggggaggtggcgccgcac
accttctgcagagtggacaagaacctgaacacgggcatgtggggtccagcgttatacctg
tgctacaagagagctgttgccaaagccaatgctctggtctacgaggcaggtctaattaac
cgatacccagaggaggacctggaatccttccctctgccggactcggtgccgatgttctgt
ttgcccatgggcgtgactgtggagagctggcccctcaacaccaagtaccagctcccggtc
ttctccacgttcgtcctcaccagtgcctctggagacaaggtgtacggcgcggccatccag
ttctacgaggcgtacccgcgggaggctctggccgagcggcagcgcgtgcggctgggcctg
gtgagcgtggtggaccggcggcccatcaccagccgctcggtgcaggtcaagaagagcgtg
tgcgtgctctcccactggcccttcttcaccgtcttccagaagtttctcaccttcgtctac
cgctattccatctcaggcccacacgtgctgcccctggagaagcacatctccagcttcatg
cacaatgtgcccttcccctccccccaacggccccgcatcctggtgcagctctccccgtac
gacaaccttctactgtgccaacctgtctcatctcccctccctctcagtggtgccagcttc
ctgaagctgctgcagaacctgggccccgagaacgcctgcacgctgctcctggccgtcctc
accgagcacaagctgctgctgcactcgctgcgccccgacgtgctcacctccgtcgccgag
gccctggtgtctatgacgttccctctgcgctggcactgcccctacatcccgttgtgcccg
ctgcggctggccgacgtgctctgtgcccccatgcccttcatcgtgggggtgcactccagc
tactttgacctctacgaccccccctctgacgtggtgtgtgtggacctggacaccaacacc
atattccaattggaagataagaagcctctgtcatggagatcacttccaaggaaacatggc
aagatgttgctcaactctctcaccaatttaaacaagaccttagagaagatctgcacgccg
ggccaggaggatgccacactggagttcctgctgacggactacgacctgatctacgggcgg
cagaagcagctggagctggagatccaggaggccttcctgcgcttcatgagctgcctgctc
aggggctaccgcacctacctgctgcccatcacccaggccccctccgaccgcaccaccgac
tgcagctcactcttcaacctccaggggtttctgaagtctcgagaccgcacacagcagaag
ttttataaccagctaaccaggacccagatgttcacccagttcatagaggagtgctcgttc
gtcagtgaccgccacgccagtctggagttcttcgatgagtgtgtacaaaaggtggatgtg
gagaaaccggaggaggtgcatctggtggacctggatgagacccacagcggggagcacacc
gtcttcatcatgcccccggaggagccccaggaggcggacggctccgagtgccaggcccat
tacagctatgagacttttcccgtcctgcagccagagctgtttgaccggccgcaggaccag
ctgcgcgtccccaccaagggcagcgcccccagcagccccgcgccacgccgcaccaaacag
gagatcaagctggcccagaagaaggcacagaagtactcggcggtgccggacatgtggtcc
aagtgcctgctgggtcactgctacggcctctggttcatctacctgcccaccttcgtccgt
gcggagagcaccaaggtgcgcaccctgcacaccgcctacgaggtgctcaagcacatggag
acgcgcaaggtggtgctgcctgacgaggtgtgttaccggatcctgatgcagctgtgtggc
cagtacggtcagcccgtgctcgcggtgcgcgtgctcctggagatgaagaaggccggcata
acgcccaacaccatcacctacggctactacaacaaggctgtgttggagagcaagtggccc
tccaccagtcacggcggccggctgcgctgggcaaagctacgcaacgtggtaatggcagtg
gcgcagttcagacagccaatcaaacaccggcagaagagtgactccgtgagctccagatca
gatgtcatcttctctaagccccgtccccactctgctctggttcgccagaacagctggagc
ggcttgagtgaaagctccagccacgagtcattgaacagcctgctccccaagagcaacagc
ctcagcagcatgcgctcctccactgacccagaggtcaagttgaccaggaaagcgctgctg
cggaactccggcggcgcggacgaccccgtctcggcccgcaaacctcctgccgggccgcca
gaagtccccgcagggctgcctccgtctggggtcctcgtcaagcgcagccaggtgtgcctg
tccaccttctacaaggactacgccgagacccccgagacccacccagactgcaggtgccag
ccaggggagagggagagcaggtcgacggacgccagagacagcttgagcagaaagacgctg
gacgagaactacaaccacgtggcgtcgccgagccgcggcctggcggggaagctgcagcag
ctgctcacgcccacgcgccaccgggcgttcgtgcggcgggcggccagcgtggacgagcgg
cggccgggagggggcagcggctccggatcgggcagcaaggcggcggagcggaggcaggcc
cgcaaggcgcaagtcaccgagaccttcctcagggccaaggagcggctggtcaacgccacc
tctgagagttcactgtccgtcggaagtgacattgacctgaccgacacaccgcccggtctg
aactttccgctgaggaaatcctgggaccccacgccagagggagccggactggaggtgttg
atgtcgagttgctctctgtgccggagctgcaactcgctggtgtacgacgaggagatcatg
gcgggctggacgtctgacgactccaacctgaactccagctgcccgttctgctcggccacc
ttcgtcccgctgctcaacgcggagatctgcgacctgggccccgtcagcagctctgagcgg
agcaccttgaacgctgaggatgaggtggagagtgccatgaggccccctggtggtcaagag
ggctcagagcgcccgctccccaacggcctgagtgacgactccagctccgagaccagctgc
tactcggagagcagcagcagcaacaccaccagcggcctgtctgtgggcggacctccgctg
gtgacggtggcctacctgagcccgctggtgctccgcaaggagctggagagcctgctggag
aacgagggcgaggccgtgctctcccagccacagctgctggacagccactccatcatcttc
tggaacctggtctggtacttccagcgcctgggcctgcccagcaacctgctgcagctcgta
cgctcctcacagctcgccgcacacatcacgcagagcatagagaaccctgcggtgcgcgtc
aggcttctgtgggacactctgacgccagatacggacttctggcctcctctctacgtcctc
tggagaatacacagcggtgtccgcatgctgcggaaccacagctggcgccggcacaaccac
cccttcaccctcagcttcctggaggaagtgctacgctgggtcggcatgaacgaggtacac
aaggcggtcaccctcttactggataccatcgccaagcaaccgggcaaccctcggatccag
aggagtttgtacagggagatcctgttcctgaccctggctgctatggggaaagatcatgtc
gcggcgttcgataagaagtacaagacggcttactctcggctaagcggctctctgggccgg
gacgagctgcggcggaagcgggggcagccgcccagccccaaggccgtggactgccgacgc
tgcttcctgtatcctctcgagtgctga
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integrated database retrieval system
