Sardina pilchardus (sardine): 134082661
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Entry
134082661 CDS
T10667
Symbol
pop1
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
134082661 (pop1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spil03009
]
134082661 (pop1)
03016 Transfer RNA biogenesis [BR:
spil03016
]
134082661 (pop1)
03029 Mitochondrial biogenesis [BR:
spil03029
]
134082661 (pop1)
Enzymes [BR:
spil01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
134082661 (pop1)
Ribosome biogenesis [BR:
spil03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
134082661 (pop1)
Transfer RNA biogenesis [BR:
spil03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
134082661 (pop1)
Mitochondrial biogenesis [BR:
spil03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
134082661 (pop1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POP1_C
POP1_N
POPLD
Motif
Other DBs
NCBI-GeneID:
134082661
NCBI-ProteinID:
XP_062394520
LinkDB
All DBs
Position
6:13569980..13581448
Genome browser
AA seq
1002 aa
AA seq
DB search
MSGAKHRMRNKKMRDQPTSVTYSASGWRNGGDTPAGRASDFHHAKGQDLPQQGGGWVRGH
QSGGSVYPKELPKYITSTYFARARSAEVKAMLKAVNKTTGSCHTAGALPKHMRRRAMSHN
TKRLPTRLREGAQRMLEKSLQAAKKEKKEESKAKSRKARRRHGNLLLEFNRRQRKNIWLE
THIWHAKRFHMVKKWGYCLGVRPTLKCYRACYRAMSSHCLLQDLSYYCCVELQGPEEQLL
SALSRLTSKDTGPTFAAVQCLSGRRQGSVVLYRPDQYPAQPLGPVLFLWRPRSEGSTHRQ
LWIWGHPTLKQDLLSELQALCQCSEAVMPVPEPVPSPAVEAVAVPTKDPPQKPVTGRKRK
RAEQDSDGQPAKKILGDGTRSPTCPVTWKSPTTGIVINDLTMEMVRYRLIGPLSHTVLTE
ALSPATDCEEAAKSGQSCFWWPEYSNQEQNMALHREQADVFQLLKGVYSSTEIPAGSVLG
LTVDDPRITLPRRRVRAQPDLQQAIGVDEEKRRALTLQGVPEHCCQSALWDRSVRDNVTD
NKLPEKELNRMRSELLVPGSQLTPTPLQGRVPMLLVHQPGKQLGQEMPSWGVGWDLLLPK
GWGMAFWVPLVYRGVRVAGLQMSQKHSQHKGAPHFPHDYPDCPAGARFQDEQQAELMDKF
TRRPPAKRTNYIKHGCLAPFRCPWQQLVEEWVEIVKETGKGSDSRTEVETAGAPPSRFSV
LRSRKVLKQLSAWCRPSSSRGQRLQRGPQPPPPPPLSPAAAAALRASHGQGLAWARFSLL
AKGRPELHAMVCAPTEEDLRLLSRDPQCAGPQEPRHTDHFRKHVKSARKARKSKRSDEKA
EGASAEKATTKKPDAASDPSSGSADQPGSVPEVTSTPASVSDGDSSAIPALAWPPVATPD
QDPSAAAPAAAAAAPAEAERLVLGLWPEPLPSVTSHCSRVTLGWVTQGDFSLTAGCGEAL
GLVSLAGLLHVLLGQPPERRGIVLLRNPSSLQYRFAKVTIEA
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggggccaaacataggatgcgcaataagaagatgagagatcagcccaccagtgtg
acctattccgcgtcaggctggcgcaatggtggagacactcctgccggtcgtgccagtgac
ttccatcatgcgaaggggcaagacttgccacaacagggcggtgggtgggtcagaggccat
cagtcaggtggctcggtgtaccccaaggagcttcccaaatacatcaccagcacatatttt
gccagggccaggtctgcagaggtgaaggcgatgttgaaggctgtcaacaagacgactggc
agctgccataccgccggcgctctccccaaacacatgagacgtagagccatgagccacaac
accaaacggctgcccaccaggctacgggaaggagcacagaggatgttggagaaaagtctg
caagctgcaaagaaggagaagaaggaggagtcaaaggccaaaagccgcaaagcccgtcgt
cgtcatggtaacctgctcctggagttcaaccgtagacagaggaagaatatctggttggag
acgcacatctggcatgccaagcgcttccacatggtgaagaagtggggttactgtctgggg
gtgaggcccactctaaagtgctaccgggcctgctacagggccatgagcagccactgcctc
ctgcaggacctgtcctattactgctgtgtggagctgcagggcccagaggagcagctcctg
agcgccctctccaggctcaccagtaaagacacggggccaacttttgcggcggtgcagtgc
ctatcggggcgcaggcagggcagtgttgttctgtacagacctgatcagtaccctgcccaa
ccgctgggccctgtgctcttcctttggagaccccgtagtgagggctctactcacagacag
ctgtggatatggggtcaccccacactaaagcaggacctcctgtctgagctgcaagccttg
tgccagtgctcagaggcggtgatgccagtgcccgaacctgtgcccagcccagcagtggaa
gccgtagcagtgccaaccaaggacccgcctcagaaaccggtcactgggcggaagaggaag
agggcagagcaggactctgatggccagccagccaagaagatacttggggacgggactcgg
tcacccacctgccctgtcacatggaagtcccctacaactggaatagtcattaatgacctc
accatggaaatggtgcgctatcgtctcattggtccactctctcacacggtcctgactgag
gctctgtctcctgccacagactgtgaggaagcagctaaaagcgggcagtcatgcttctgg
tggccggagtactccaaccaggagcaaaacatggctcttcaccgagaacaagccgacgtc
ttccagctactcaagggtgtgtattcatccactgagatcccagcaggctctgtcctgggc
ctgaccgtagatgatccccgcatcaccctgccccgcaggagagtccgagcccagcctgac
cttcagcaggccataggtgtggacgaggagaagaggagagccctcaccctgcagggagtc
ccagagcactgctgccagagtgccctgtgggaccggagcgtaagggacaacgtcaccgac
aacaagctacctgagaaggagctgaatcggatgcggagcgagctcctggtgcccggctcc
cagctgacgcccacccctctgcagggccgcgtgcccatgctgctggtgcaccagccgggc
aaacagctgggccaggaaatgccctcctggggggtgggctgggacctgctgctgcccaaa
ggctggggcatggccttctgggtgcccctggtgtacagaggggtccgtgtggccggtctc
cagatgagccagaaacactcccagcacaagggggcgccccatttcccccacgactaccca
gactgccctgcaggcgcccgcttccaggacgagcagcaggcagagctcatggacaagttt
acgaggcgtccgcccgccaagaggaccaattatatcaaacacggctgcctggcaccgttt
cgatgcccctggcagcagctggtggaggagtgggtggagattgtcaaggagactggcaag
ggctccgattcacggactgaagtcgagacggccggagctccacccagccggttttctgtg
ctcaggagcaggaaggtgctgaagcagctgtcggcgtggtgtcggcccagctcctccaga
ggccagcggctccagcgcggcccccagccccctcctcctccccccctctccccggccgcc
gccgccgccctgcgggcctcgcacggccagggcctggcgtgggcgcgcttctcgctgttg
gccaagggccggccggagctgcacgccatggtgtgcgcgcccacggaggaggacctgcgt
ctgctgagccgcgacccccagtgcgccgggccccaggagccccggcacacggaccacttc
aggaagcacgtcaagagcgctcgcaaggccaggaagagcaagaggagcgacgagaaggca
gagggggcctcagcagagaaggcgaccaccaagaagccggacgcggcctccgacccgagc
tcggggtccgctgaccagccaggttctgtcccagaggtcacctccacccccgctagtgtt
tcggacggcgattcgagcgccattccagctttggcctggcctcccgtcgccacacctgac
caggacccctcggcggccgcccctgctgctgcagctgctgcccctgcggaggccgagagg
ctggtcctgggcctgtggccggagccgctgcccagcgtgacgtcgcactgctcgcgtgtg
accctgggctgggtgacgcagggcgacttctcactgacggcgggctgcggggaggccctg
gggctggtcagcctggcgggcctgctgcacgtgctcctgggccagccgccagagcgcagg
ggcatcgtgctgctcaggaacccctcctctctgcagtaccgcttcgccaaggtcaccatc
gaggcctga
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