Sardina pilchardus (sardine): 134082710
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Entry
134082710 CDS
T10667
Symbol
sema6e
Name
(RefSeq) sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E isoform X1
KO
K06842
semaphorin 6
Organism
spil Sardina pilchardus (sardine)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
134082710
NCBI-ProteinID:
XP_062394609
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Position
6:complement(15534835..15651529)
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AA seq
1103 aa
AA seq
DB search
MRLSLGPPRPLLAWALALVLSCCPLPARLGTMPFPQDLEPISIVGSEHSYLYPSFQGLME
DNDTARLGLDFQRMLRINHMLYIAARDHVFAVNLTSSSQQIVTQQKLTWKTKNVEKCTVR
GKNSDECYNYIKVLVPRNDETLFACGTNAFNPTCRNYKMSSLEQVGEEVAGQARCPFESR
QSNVGLFAGGDFYSATMTDFLASDALIYRSLGESSPVLRTVKYDSKWLREPHFQHAIEYG
NYVYFFLSEIAVEYTALGKVVFSRVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPGDS
FFYFDVLQSLTNVMQINQKPAVLGVFTTQANSITGSAVCVFYMDDIERVFNGKFKEQRNS
ESAWTPVPEEMVPKPRPGSCAGDGPAAGYKSSTTFPDDTLTFIKSYPLMDEAVPSVNDRP
CFTRTTSRFKLTQLAVDTSAGPYKNHTVLFLGSEDGRVLKVLASTHANASFSTQLLEDID
VYNPAKCNIRGEDRRVLGLELDKEQHALFVAFSSCVVRVPLSRCADYGTCRKSCLSSRDP
YCIWLKMGLCATVAPGIKQGFDQDVESGYTQYPDSCHDVLATTRKQNTVVDSAYGKTTPT
TTASTTSQAAVLPKVPGDSQKGTGPEGHPSVGDQGSPDSEAISVEGVRRPPEVEKTNHSV
HYTLLIACVLVAFVLGAFLSGFLVSCYCNHSSSKTKRLPKDPEVSIPHALSLRSLAKLNG
LLESQSKEDKLDVPSPKVYNSFFGNGKEHPSRRHHGHHGMGDLIHPHHHHHHHHHGSELS
GLPTPDSTPELPIKSMKAFKNQWEKNQNCNNAKEPKPHNVPGSRPSSGLHQQVFPFSHGL
SNGQALGGSMHLEERKIHNAERVMSQQQQQPYHGYPHKVVDVTSLDELLKHIHEINVTTG
GLGGGLGGGKVMTSSMSAHAGQMAFANRVQPQIPETETAPYYSSSTLPRDSLTRRMDVPP
DMPMPPPPSQSTLERLARHPGHHRHSLIAASKMAAGGGGVGGGMVARQHSFNHQGGRPLM
LARMNSAGSSGGGIGGVGICEVRHPLIPASYLTRQHSYSEQPECHRGGGVNVRRTASLKP
DVPPKPLFIPATSPVNQQGKFNY
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgtcgctgggcccaccgcggcccctcctggcctgggccctggccctggtcctc
tcctgctgccccctccctgcccgcctcgggaccatgcccttcccccaagacctggagccc
atcagcatcgtcgggagcgaacactcgtacctgtacccgagcttccagggcctgatggag
gacaacgacacggcccgcctgggcttggatttccagcggatgctccgcatcaaccacatg
ctctacatcgctgccagggatcacgtctttgccgtcaatctcacttcctcatcacagcag
attgtcactcagcagaagctgacatggaagacaaagaatgtggagaaatgcacagtgagg
ggcaagaacagcgatgaatgttacaactacatcaaagtgctcgtcccgcgcaacgacgaa
accctgttcgcgtgcggcaccaacgccttcaaccccacctgccggaattacaagatgtcg
agtctggagcaggttggagaggaggtcgctggccaggcacgctgcccattcgagtcgcgg
cagtccaacgttggcctcttcgctggtggggatttctactcggcgaccatgacggacttc
ctggccagcgacgcgctgatctaccgcagcctgggcgagagcagccccgtcctgcgcacc
gtgaaatacgactcaaagtggctgagagagcctcatttccaacatgccattgagtacggg
aactatgtgtacttcttcctgagcgagattgcagtggagtacaccgccctaggcaaggtg
gtgttctcgcgagtggcccgggtctgcaagaacgacaacggcggttccccgcgggttctg
gagcgctactggacctccttcctgaaggcgcggctcaactgctcggtgccgggcgactcc
ttcttctacttcgacgtgctgcagtccctgaccaacgtcatgcagatcaaccagaagccc
gccgtgctgggagtgttcaccacgcaagccaacagtatcaccggctctgcggtgtgtgtg
ttctacatggacgacatcgagagggttttcaacggcaagttcaaggagcagcgcaacagc
gagtcggcctggacccccgtgcctgaggagatggtacccaagccgaggcctggctcctgt
gctggcgacggcccagcagcaggctacaagtcctccacgaccttcccagacgacacgctg
accttcatcaagtcctacccgctgatggacgaggcggtgccctcggtcaacgaccggccg
tgcttcacgcgcaccaccagcaggttcaagctgacccagctggcggtggacacgtcggcc
gggccgtataagaaccacacggtgctgttcctgggctcggaggacggccgcgtgctcaag
gtgctggccagcacgcacgccaacgcctccttcagcacgcagctcctggaggacatcgac
gtctacaaccccgccaagtgtaacatccgcggggaggaccggcgcgtgcttggcctggag
ctggacaaggagcagcacgccctgttcgtggccttctccagctgcgtggtgcgcgtgccc
ctcagccgctgcgccgactacggcacctgcaggaagagctgcctgtcctcacgagacccc
tactgcatctggctgaagatggggctgtgcgccaccgtggcgcctggaataaagcaaggg
tttgaccaggacgtggagagtggttatacgcagtatccagacagttgtcatgacgttttg
gccaccacgcgaaaacagaacaccgtagtggattctgcttatggaaagaccacccccact
acaaccgccagcacaaccagtcaggcagcagtccttcccaaggtgcccggtgactcacag
aaaggtacagggcctgaggggcacccttcagtgggggaccagggctcgcctgactctgag
gccatcagtgtagagggagtgcgacgccctcctgaggtggagaagaccaaccacagcgtc
cactacaccctgctgatcgcctgcgtgctcgtggccttcgtcctgggcgcgttcctgtcc
ggcttcctggtctcgtgctactgcaaccacagctccagcaagaccaagcggctgcccaag
gacccggaggtgtccatcccccacgcgctctcgctccgcagcctggccaagctcaacggc
ctgctggagagccagagcaaggaggacaagctggacgtgccctcgcccaaggtctacaac
tccttcttcggcaacgggaaagagcacccctcgcgaaggcaccacgggcaccacggcatg
ggcgacctcatccacccgcaccaccaccaccaccaccaccaccacggctcggagctgtcc
gggctgccgacgcccgactccacgccggagctgcccatcaagagcatgaaggccttcaag
aaccagtgggagaagaaccagaactgcaacaacgccaaggagcccaagccgcacaacgtg
cccggctccaggcccagctcggggctgcaccagcaggtgttccccttctcgcacggcctg
tccaacggccaggcgctgggcggctccatgcacctggaggagcgcaagatccacaacgca
gagcgcgtgatgagccagcagcagcagcagccgtaccacggctacccgcacaaggtggtg
gacgtcacgtcgctggacgagctgctcaagcacatccacgagatcaacgtgaccacgggc
ggcctgggcggcgggctcggcggcggcaaggtcatgacctcgtccatgtcggcgcacgcc
ggccagatggccttcgccaaccgcgtgcagccgcagatccccgagacggagacggcgccg
tactacagctcgtccacgctgccgcgcgacagcctgacgcggcggatggacgtgccgccc
gacatgcccatgccgccgccgccgtcgcagtccacgctggagcgcctggcgcgccacccc
gggcaccaccgccactcgctcatcgccgcctccaagatggcggccgggggcggcggagtc
ggcggcgggatggtggcgcgccagcacagcttcaaccaccagggcgggcgcccgctcatg
ctcgcgcggatgaactccgccgggagcagcggcggcggcatcggcggcgttggcatctgc
gaggtgcgccacccgctcatccccgccagctacctgacgcgccagcacagctacagcgag
caacccgagtgccaccgcggcggcggcgtcaacgtgcgccggacggcgtcgctcaagcca
gacgtgccccccaagccgctcttcatccccgccacctcgcccgtcaaccagcagggcaag
ttcaactactga
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