Sardina pilchardus (sardine): 134082778
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Entry
134082778 CDS
T10667
Symbol
rab5ab
Name
(RefSeq) RAB5A, member RAS oncogene family, b
KO
K07887
Ras-related protein Rab-5A
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04137
Mitophagy - animal
spil04144
Endocytosis
spil04145
Phagosome
spil04148
Efferocytosis
spil05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
134082778 (rab5ab)
04145 Phagosome
134082778 (rab5ab)
04137 Mitophagy - animal
134082778 (rab5ab)
04148 Efferocytosis
134082778 (rab5ab)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
134082778 (rab5ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spil04131
]
134082778 (rab5ab)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spil04147
]
134082778 (rab5ab)
04031 GTP-binding proteins [BR:
spil04031
]
134082778 (rab5ab)
Membrane trafficking [BR:
spil04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
134082778 (rab5ab)
Endosome - Lysosome transport
134082778 (rab5ab)
Exosome [BR:
spil04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
134082778 (rab5ab)
Exosomal proteins of other body fluids (saliva and urine)
134082778 (rab5ab)
Exosomal proteins of colorectal cancer cells
134082778 (rab5ab)
Exosomal proteins of bladder cancer cells
134082778 (rab5ab)
GTP-binding proteins [BR:
spil04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
134082778 (rab5ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
Gtr1_RagA
RsgA_GTPase
AAA_16
MCR_beta
DUF1327
Motif
Other DBs
NCBI-GeneID:
134082778
NCBI-ProteinID:
XP_062394727
LinkDB
All DBs
Position
6:complement(16901306..16909080)
Genome browser
AA seq
216 aa
AA seq
DB search
MASRGGVSRPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFGRAKNWVKELQ
RQASPNIVIALAGNKADLANKRALDFQLAQSYADDNSLLFMETSAKTSMNVNEIFMAIAK
KLPKSEPQPTGASASRNRGVDLTETAQPTKGPCCSN
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtcggggtggtgtttcaagacccaacgggccaaatgccggcaataaaatttgc
cagttcaagctggtactgctgggagagtcagctgtgggaaaatccagtttggtgctccgg
ttcgtcaaaggccagtttcatgaatttcaggagagcacaataggagccgccttcctcact
cagacagtgtgtttggatgacacaacagtcaagtttgagatctgggacacagcagggcag
gagcgctatcacagtctggcgcccatgtactacaggggagcgcaggcggccatcgtggtc
tacgacatcacaaatgaggaatcatttggacgagcgaaaaactgggtgaaggaacttcag
agacaagccagtccaaacatcgtaatagccttggcaggcaacaaggctgaccttgccaac
aagagagccctggactttcagcttgcacagtcgtacgcagatgacaacagcctgctcttc
atggagacctctgcaaagacatccatgaatgtcaacgaaatcttcatggctattgcaaag
aaattgcccaagagcgaaccccagccaaccggagcgagtgccagccgcaaccggggagtg
gaccttacagagacagcccagcccactaaaggaccatgttgcagtaactaa
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