KEGG   Sardina pilchardus (sardine): 134082807
Entry
134082807         CDS       T10667                                 
Symbol
rbm8a
Name
(RefSeq) RNA-binding protein 8A isoform X1
  KO
K12876  RNA-binding protein 8A
Organism
spil  Sardina pilchardus (sardine)
Pathway
spil03013  Nucleocytoplasmic transport
spil03015  mRNA surveillance pathway
spil03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spil00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    134082807 (rbm8a)
  09122 Translation
   03013 Nucleocytoplasmic transport
    134082807 (rbm8a)
   03015 mRNA surveillance pathway
    134082807 (rbm8a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spil03019]
    134082807 (rbm8a)
   03041 Spliceosome [BR:spil03041]
    134082807 (rbm8a)
Messenger RNA biogenesis [BR:spil03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     134082807 (rbm8a)
Spliceosome [BR:spil03041]
 Complex C
  Other components
   EJC/TREX
    134082807 (rbm8a)
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 134082807
NCBI-ProteinID: XP_062394785
LinkDB
Position
6:17586315..17592456
AA seq 174 aa
MADVLDLHEAGGEDFPMDEDGDESIHKLKEKAKKRKGRGFGSDEGARSRVREDYDTVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNLHLNLDRRTGYLKGYALVE
YETYKEAQASMEGLNGQDLMGQPISVDWGFVRGPPKSKRRGGRRRSRSPDRRRR
NT seq 525 nt   +upstreamnt  +downstreamnt
atggcggacgttttggatcttcacgaagctgggggcgaggattttcctatggatgaggat
ggtgatgaaagcatccataagttgaaagagaaggcaaagaaaagaaaaggacgtggtttt
ggttcggatgaaggcgcaaggtccagagtgagggaagactacgacacagtggaacaggat
ggagatgagcctgggccacaaagatctgtagagggctggatcctttttgtgactggtgta
cacgaggaagctacagaagaggacatccatgacaaattcgcagagtatggagaaatcaag
aacttgcatctgaacttggatcgacgaacaggctaccttaagggctacgcactggtggag
tatgagacgtacaaagaagcccaggcttccatggaagggttgaatggtcaagacctaatg
ggccagccaatcagtgtggattggggctttgtaaggggacccccgaagagcaagagaagg
ggaggccggagacgcagccggagtccagacagaagacgccgctga

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