Sardina pilchardus (sardine): 134082837
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Entry
134082837 CDS
T10667
Symbol
lingo4b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 4b
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spil04131
]
134082837 (lingo4b)
Membrane trafficking [BR:
spil04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
134082837 (lingo4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
I-set
Ig_3
ig
LRR_LRWD1
LRR_6
LRRNT
LRR_EndoS
V-set
Ig_2
LRR_Zer-1
C2-set_2
LRR_9
Motif
Other DBs
NCBI-GeneID:
134082837
NCBI-ProteinID:
XP_062394828
LinkDB
All DBs
Position
6:complement(18347243..18357042)
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AA seq
610 aa
AA seq
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MFGGPVAHLWAWGVPLFLWCASVSAADIVPWPCPQRCDCSPETQEVNCSRKYLTAVPEGF
ASDTKRLDLSSNRLKTLSRRQFLGLSKLQELDLSNNLLSMMEVEAFQGLQSLRVLKIRGN
RLKIIPVGVFTGLSSLRSLDLSENEILVFLDYTFRDMAALQQLNAAENDLVFISQRAFVG
LQSLQELNVDRSNFTSMPSEALSQLGGLVKLRLRRLTIGALPDNAFRRLHQLRSLKILHW
PSLDTVGSNSLLGLNLTTLAITNCNLSAVPYAAMRHLIYLRYLDLSYNPITTILSNQLGD
LLRLQELHLVGGGLLRIEPAAFRGLAHFRLLNLSSNRLTTLEESAFHSVGNLQILRLDRN
PLACDCRLLWVARRRLRLDFDGRQPVCSAPERARGRRISDFSEGELPVVFTCRQAYIPDR
RPQEVLAEEGTTALFDCRAEGYPLPSITWLSTQQTMLTSMGRIRVLANGSLEVRYAQVQD
SGTYMCLATNAAGNDSIFVKLQVQGFARNRTAPYYPEGGWSTTPYPPSTNISAQVANPYP
FDAKTLVIATTMGFLSFLSSVAICFVFMFFWSQSKGQIKHTATIDFVPRSSMGGGGGGDG
DTGRFTMKLI
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgtttggggggcctgttgcccacctgtgggcgtggggtgtgccgctcttcctgtggtgc
gccagtgtctcggccgcagacatcgtcccgtggccctgcccgcagcgctgcgactgcagc
ccggagacgcaggaggtgaactgctcccgcaagtatctgacggccgtgcccgagggcttc
gcgtccgacaccaagcgcctggacctgtcgtccaaccggctgaagacgctgagccgccgg
cagttcctgggcctgtccaagctgcaggagctggacctgagcaacaacctgctctccatg
atggaggtggaggcctttcaggggctgcagagcctccgcgtgctcaagatccgcggcaac
cggctcaagatcatccccgtgggcgtcttcacgggcctgtccagcctgcgcagcctggac
ctcagcgagaacgagatcctggtcttcctggactacaccttccgcgacatggccgccctg
cagcagctgaacgcggccgagaacgacctggtgttcatctcgcagcgcgccttcgtgggc
ctccagagcctgcaggagctcaacgtggaccgcagcaacttcacgtccatgcccagcgag
gcgttgtcgcagctgggcggcctggtcaagctgcgcctgcgccggctgaccatcggcgcg
ctgcccgacaacgccttccgtcggctgcaccagctgcgcagcctcaagatcctgcactgg
ccctcgctggacactgtgggcagcaacagcctgctgggcctcaacctcaccacgctggcg
atcaccaactgcaacctgagcgccgtgccgtacgccgccatgaggcacctgatctacctg
cgctacctggacctctcctacaaccccatcaccaccatcctgagcaaccagctcggggac
ctgctgcggctgcaggagctgcacctggtcggcggcggactgctgcggatcgagccggcg
gcgttccgggggctggcgcacttccggctgctcaacctgtcgtccaaccggctgaccacg
ctggaggagagcgccttccactcggtgggcaacctgcagatcctgcgcctggaccgcaac
ccgctggcgtgcgactgccgcctgctgtgggtggcgcgccggcgcctgcggctggacttt
gacgggcgccagcccgtgtgctcggcgcccgagcgcgcccgcggccggcgcatcagcgac
ttctccgagggcgagctgccggtggtgttcacctgccgacaggcctacatccccgaccgg
cggccccaggaggtgctggccgaggagggcaccacggcgctgttcgactgcagggccgag
ggctacccgctgcccagcatcacctggctgtccacgcagcagaccatgctcacgtccatg
ggccgcatccgcgtgctggccaacggctcgctggaggtgcgctacgcccaggtgcaggac
agcggcacctacatgtgcctggccaccaacgccgccggcaacgacagcatcttcgtcaag
ctccaggtgcagggtttcgcgcgcaaccgcacggcgccctactaccccgagggcggctgg
agcaccacgccgtacccgccctccaccaacatctccgcgcaggtggccaacccgtacccc
ttcgacgccaagactctggtcatcgccaccaccatgggcttcctgtccttcctgagctcg
gtggccatctgcttcgtgttcatgttcttctggagccagagcaagggccagatcaaacac
acggccaccattgactttgtgccgcgctcctccatgggcggcggcggtggtggggacggg
gacacggggaggttcaccatgaagctcatctga
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