Sardina pilchardus (sardine): 134082855
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Entry
134082855 CDS
T10667
Symbol
eif4a3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03013
Nucleocytoplasmic transport
spil03015
mRNA surveillance pathway
spil03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134082855 (eif4a3)
09122 Translation
03013 Nucleocytoplasmic transport
134082855 (eif4a3)
03015 mRNA surveillance pathway
134082855 (eif4a3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spil03019
]
134082855 (eif4a3)
03041 Spliceosome [BR:
spil03041
]
134082855 (eif4a3)
03009 Ribosome biogenesis [BR:
spil03009
]
134082855 (eif4a3)
03012 Translation factors [BR:
spil03012
]
134082855 (eif4a3)
Enzymes [BR:
spil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134082855 (eif4a3)
Messenger RNA biogenesis [BR:
spil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
134082855 (eif4a3)
mRNA cycle factors
Stress granule specific factors
134082855 (eif4a3)
Spliceosome [BR:
spil03041
]
Complex C
Other components
EJC/TREX
134082855 (eif4a3)
Ribosome biogenesis [BR:
spil03009
]
Eukaryotic type
90S particles
Helicases
134082855 (eif4a3)
Translation factors [BR:
spil03012
]
Eukaryotic type
Initiation factors
eIF-4
134082855 (eif4a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
AAA_30
TniB
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
134082855
NCBI-ProteinID:
XP_062394852
LinkDB
All DBs
Position
1:14328917..14339519
Genome browser
AA seq
406 aa
AA seq
DB search
MAATQAPVRKRILKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQ
QRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKV
LLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLV
LDEADEMLNKGFKEQIYDVYRYLPPATQVCLISATLPHEILEMTNKFMTDPIRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVS
SMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI
GRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacacaagctcctgtgagaaagcggatcctgaaggaggaagatatgactaaa
gtggaatttgagaccagtgaagaggttgatgtgacgccaaccttcgatacaatgggcctg
cgagaggaccttctccgtgggatctacgcttacggatttgagaaaccgtccgccatccaa
cagagggccatcaaacagatcatcaagggcagagacgtgattgcacagtcacagtctggt
acgggtaaaacagccaccttttgcgtttccgtacttcagtgtctggacatccaggtgcga
gaaacccaggcattgattttggctccaacaagagagttggctggacagatccaaaaggtg
ttgttggctctgggtgactacatgaatgtccagtgtcacgcctgcatcggagggaccaac
gtcggcgaggacatcaggaagctggactacggacagcacgtggtggccggcaccccagga
cgtgtcttcgacatgatcaggcggaggagtctgaggactcgcgccatcaagatgctcgtg
ctggacgaggccgacgagatgctcaacaaaggttttaaggagcagatctacgatgtgtac
cggtacctgccccccgccacccaggtgtgcctcatcagcgccactctgccccacgagatc
ctggagatgaccaacaagttcatgacagaccccatccgcatcctggtcaaacgtgatgag
ttgactctggaaggcatcaagcagttctttgtggccgtggagcgtgaggagtggaaattt
gacacactgtgcgacctctacgacacactcaccatcacacaggccgtcatcttctgtaat
accaagaggaaggtggactggctgacggagaagatgagggaggccaacttcaccgtgtcc
tccatgcacggagacatgccccagaaggagcgcgagtccatcatgaaggagttccgctcc
ggagccagccgcgtgctgatctccacagacgtgtgggctcgaggtctggatgtaccgcag
gtgtccctcatcatcaactacgacctgcccaacaacagagagttgtacatccataggatt
ggtcgatccggtcgttacggccgtaagggtgtggccatcaactttgtgaagaacgacgac
atccgcatcctgcgagacattgagcagtactactccacacagatagatgagatgcccatg
aacgtggcggacctcatctaa
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