Sardina pilchardus (sardine): 134082919
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Entry
134082919 CDS
T10667
Symbol
ddx61
Name
(RefSeq) probable ATP-dependent RNA helicase ddx6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03018
RNA degradation
Brite
Enzymes [BR:
spil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134082919 (ddx61)
Messenger RNA biogenesis [BR:
spil03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
134082919 (ddx61)
mRNA degradation factors
5'-3' decay
Decapping complex
134082919 (ddx61)
Chromosome and associated proteins [BR:
spil03036
]
Eukaryotic type
Gene silencing
piRNA pathway
134082919 (ddx61)
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134082919
NCBI-ProteinID:
XP_062394950
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All DBs
Position
6:complement(20691701..20702572)
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AA seq
492 aa
AA seq
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MATARTENPTSVMGLGKPNGQLRGPPKPAGLQPGPISAARQPTMASIVSQTGSTIPQTSD
GIRFGDDWKKCLQLPPKDTRMRTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQE
ESIPIALSGRDILARAKNGTGKSGAYLIPLLERIDLKKDYIQAIVLVPTRELALQVSQIS
IQISKHMGGVKVMATTGGTNLRDDIMRLDETVHVIIATPGRILDLIKKGLAKVDRVQMLV
MDEADKLLSQDFVTLIEDIISFTAKHRQILLYSATFPVTVQKFMAKHMQKPYEINLMDEL
TLKGITQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSTQRVELLAKKITQLGYSCFYI
HAKMMQEYRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRIGR
SGRYGHLGLAINLITSEDRFNLKGIEDQLSTDIKPIPGSIDKSLYVAEFHSVDPDAEQET
DAARKAGDPNAH
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggctactgcgagaacagaaaacccaacctcagtcatgggactgggcaaaccaaacggg
cagctcaggggaccacccaagcctgctggacttcagcctggacccatatctgctgccaga
caaccaaccatggcatctattgtgtctcagactggaagcaccataccccaaaccagtgat
ggcattcggtttggcgatgactggaagaagtgcctgcagctaccaccaaaagacaccaga
atgagaacctcagatgtgacctctacaaaggggaatgagtttgaagactactgcctaaag
cgtgagctactgatgggcatctttgagatgggctgggaaaaaccctctcccattcaggag
gagagcattcctattgccctgtctggcagggacatcctggcccgggccaagaacggcaca
ggcaagagtggagcctacctcatccccttactggagaggatagacctcaagaaggactac
atccaagccattgtgttggtgcccactcgtgagctggccctgcaggtcagccagatcagc
atccagatcagcaagcacatgggtggggtcaaggtcatggccaccacaggaggcaccaac
ctgagggatgacatcatgcgcctggatgaaacggtccacgttataatagccactccaggc
aggatcctggacctcatcaaaaaaggtttggccaaagtggacagagttcaaatgttggtg
atggatgaggcagataaacttctctctcaggactttgtgacactcatcgaggacatcatt
agctttacggccaagcatcgacagatcctactctactctgccaccttccccgtcactgtg
cagaagtttatggcaaaacatatgcagaagccctacgagatcaacctgatggacgagctt
actttgaagggcattacccagtattatgcctatgtcactgaaaggcagaaagtccactgt
ctgaacacgcttttctccaggctgcagatcaatcagtccatcatcttctgcaactccacc
cagagggtggagctcttggccaaaaagatcacccagctgggctactcctgcttttacatc
cacgccaagatgatgcaggagtacagaaaccgtgtgttccacgacttccgaaatgggttg
tgcaggaacttggtctgcacagacctgttcaccaggggaattgatatccaggctgtcaac
gtagtcatcaactttgacttccccaaaaatgcagagacatacctgcatcgcattggcaga
tcaggccgatatggtcacttgggtctggccattaacctaatcacgtctgaggaccgcttc
aacctcaaaggcatcgaggaccagctgtccaccgacatcaagcccattccaggctccatt
gacaagagcctctacgtggcggagttccactccgtggacccagacgctgagcaggagacg
gatgcagcgcgcaaagcaggggaccccaacgcgcattag
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