Sardina pilchardus (sardine): 134082951
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Entry
134082951 CDS
T10667
Name
(RefSeq) protein NLRC3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
spil04054
]
134082951
Pattern recognition receptors [BR:
spil04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
134082951
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
PRY
NOD2_WH
SPRY
zf-C3HC4_4
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
LRR_6
zf-RING_5
zf-C3HC4_3
zf-RING_2
RING_XB3-XBAT31
zf-rbx1
TRAF3_RING
zf-RING_6
CTLH
zf-Nse
Prok-RING_4
zf-NOSIP
zf-RING_10
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
134082951
NCBI-ProteinID:
XP_062395003
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Position
1:13735724..13744231
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AA seq
1096 aa
AA seq
DB search
MKNPVLFHDPKLHRADMSRPPSPVPRCVSLKREESMPLSLYFSDEPADHDLNELGADLTK
DQSMCGVCEQVLRDPVITTCGHSFCRQCISSYWKQPGLPGDQACPQCEKTCRIQPPLQPP
LDKHTDMSTQDEHRRLIKSRTHPNTEHKLSRKNKLDEDLKRVIQNHKASLKRRFENISEG
IIKPGAEILLSKIYTDLYITAGDSEGVNTKHEVWQIESASRVQTTEDTPINCNDIFKPLP
GQKRHIRTVMTKGVADIGKTVSVQKFILDWTDGVANQDVDFMFPFSFRELNLVRGDQYSL
HRLLLDFHPELKALHDEGYKQCQVAFIFDGLDESRLTLDLEQNSKLSDVEQISSVDLLIT
SLIQGTLLPSALIWITSRPAYVSQIPTQYTDQVTEVRGFNDPQKEEYFRKRIKNQNQANR
IISHIKASRSFHIMCHIPIFCWIAATVLQQMLEQDNTQEIPTTLTEMFIHFLLIQTTRKN
QKYQESHETDTKRLLESQNIILLKLAELSFKNLENGNLMFYEEDLHECGIDVREASVYSG
MCTEIFKEESVFHQKVYCFVHLSVQEFLAALYVFHSYMTKNFEAVKSLISEECRDELHPS
ITSYFLSILGLKSQDTLHVLLKSALNKALESQSGHLDLFLCFLMGICLESNQTLLKGVLD
HTHNTSNSIKETCQYIKQLDSEDLSPERYINLFHCLFEMNDHSIHKEIQKFLSSPKNINQ
NVSPVHCSALAHILLMSEEVQDEIDLRKFNTSDEGRRRLIPAVSCYRKARFADCKLTDKS
CEIVASVLQSQNSLLQLDLNGNDLGDSGVNLLSKGLSSSNCKIHTLRLSDCLISEEGCIY
LALALTSNPSHLKELDLSYNHHGESGMKLLSARLEDPDCKLEILKTDHSSVSRARPRLLR
YTCALTLDPNTADKELVLSEQKTKVTCVGEMQPYPDHPERFAWWGQVLCRDNLPGHCYWE
AEWSGQEVAIAVVYKSIERKGEDTDSLLGSNAKSWSLTCSPLRYSAWHNNKHTAMPAPSS
GSRRVGVYLNQPGGTIAFYSVSSDTLTHLHTFHSTFTEPLCPGFGLWPGSSVDLSQIMSS
SSNTTCVRGQSTIRLV
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaccctgttctgtttcatgaccctaaactacacagggcagacatgtccagacct
ccatctccagtgcccagatgtgtgtctctgaagagagaggagtccatgcctctgtccctc
tacttcagtgatgaaccagcagatcatgacctgaatgagctaggggctgatctgaccaag
gatcagtccatgtgtggagtgtgtgagcaggtactgagggatccagtcatcaccacctgt
ggacacagtttctgcaggcagtgcatcagcagctactggaagcagcctggactaccagga
gaccaagcctgtccccagtgtgaaaagacttgcagaatccaacctcctctacagcctcct
ctagacaagcacacagatatgagcacacaagatgaacacagacgcttgatcaaaagcaga
acacacccaaacactgagcataaactaagcagaaagaataaactagatgaggacctgaag
agagttatacagaatcacaaagccagtctgaagaggagatttgagaacatatctgaaggc
atcatcaaaccaggggctgagatactcctcagtaagatctacacagacctctacatcaca
gcaggagatagtgaaggggtgaatacgaagcatgaggtttggcagatagagtcagcatcc
agagtacaaacaacagaagacacaccgatcaactgcaatgacatcttcaagcccttacct
ggacagaagaggcacatcagaactgtgatgaccaaaggtgtcgctgacattggaaaaaca
gtctcagtacagaaattcattcttgactggacagatggggtggccaatcaggatgtagat
tttatgtttcccttttctttccgtgagctgaatttggtcaggggtgatcagtatagtctt
cacaggctcctgctggacttccaccctgaactgaaggcgctgcatgatgaaggatacaaa
cagtgtcaggttgcgttcatctttgatggtttggacgagagccggttgactctggatctg
gaacagaacagtaagttgtctgatgtagaacaaatatcatcagtggatcttctgataaca
agcctcattcagggaactctgcttccctctgcactcatctggataacctcacgaccagca
tacgtgagtcaaattcctactcagtatactgaccaggtaacagaagtacgaggattcaat
gacccacagaaagaagagtacttcaggaagagaatcaaaaatcagaatcaggctaacaga
atcatctcacacattaaagcatccaggagttttcacatcatgtgccacattccaatcttc
tgttggattgcagccactgtacttcagcagatgctggaacaggacaacacccaggaaata
cccactactctgactgagatgttcatacacttcctactaatccagactactcgaaagaat
cagaaatatcaagaaagccacgaaacagatacgaagaggctcttggaatcacagaacatc
atactgctgaagctagcagaactgtctttcaagaatctagagaatggcaacctcatgttt
tatgaggaagacctgcatgaatgtggcattgatgtccgtgaagcctcagtgtactctggc
atgtgcactgagatcttcaaagaagaatctgtttttcaccagaaggtctactgctttgtg
catctgagtgtccaggagtttctggcagccctgtatgtgtttcactcttacatgaccaag
aactttgaggcagtgaaatcccttatcagtgaagaatgcagagatgagctccacccatca
attacatcttattttctttcaatattaggattaaaatctcaggacactttacatgtctta
cttaagagtgcactcaataaggctttggagagccagagcggacatctggatcttttcctt
tgcttcctaatgggcatttgtctggagagcaatcagacccttctgaaaggtgtacttgac
cacacacacaacacctcaaatagcatcaaggagacatgtcagtacattaagcagcttgac
agcgaagatctctctccagaacgatacatcaatcttttccactgcttgtttgaaatgaat
gatcattccatacacaaagaaattcagaaattcctatcatcaccaaagaacatcaatcaa
aacgtgtctcctgttcactgttcagcactggcccacatacttttgatgtcagaggaggtg
caggatgagattgatctgagaaaattcaacacatcagatgaaggacgcaggagactgatc
ccagctgtgagttgctacagaaaggcacgatttgctgactgtaaactcacagataagtct
tgtgagattgtggcttcagttctccagtcacaaaactccctgctacagctggacttgaat
ggcaatgacctgggggattcaggagttaatcttctctctaagggactgtccagttccaac
tgcaaaattcatacattgaggctctctgattgcctcatctcagaggagggttgtatttat
ctggctttggctctgacttcaaacccctcccatctaaaagagctagatctgagctacaat
catcatggagaatcaggaatgaagctgttatctgctagattggaggatcctgactgtaaa
ctggagatactcaaaactgaccattcctctgtgagcagagctcgaccacgtttgctgaga
tatacctgtgcgctcacactagacccaaacacagcagacaaagaacttgttctctctgag
cagaagacaaaggtgacatgtgtgggtgagatgcagccgtatcctgaccaccctgaaaga
tttgcctggtggggtcaggtgttgtgtagagacaatctgcctggacactgctactgggag
gctgagtggagtggacaagaggttgctattgctgtggtctataaaagcatcgagaggaaa
ggggaagatactgacagcctgctgggatctaacgccaagtcctggagtctgacctgctct
cctctccgttactctgcctggcacaataataaacacactgcaatgcccgccccctcctct
gggtccagaagagtaggagtgtacctgaaccagccgggcggcactatagccttctacagc
gtctcctctgacacactcacccacctgcacactttccactccacgttcactgagcccctc
tgtccagggtttgggctttggcctggctcctcagtggacctgagccagatcatgagctcc
tcctccaacaccacctgtgtcaggggccaatccactatcagacttgtgtaa
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