Sardina pilchardus (sardine): 134083034
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Entry
134083034 CDS
T10667
Symbol
snx27b
Name
(RefSeq) sorting nexin-27b isoform X1
KO
K17936
sorting nexin-27
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spil04131
]
134083034 (snx27b)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
spil04990
]
134083034 (snx27b)
Membrane trafficking [BR:
spil04131
]
Protein recycling
Others
Others
134083034 (snx27b)
Domain-containing proteins not elsewhere classified [BR:
spil04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
134083034 (snx27b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
SNX17-27-31_F1_FERM
RA_2
PDZ_2
SNX17_FERM_C
USP7_C2
DarA_N
Motif
Other DBs
NCBI-GeneID:
134083034
NCBI-ProteinID:
XP_062395125
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All DBs
Position
6:23538265..23558207
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AA seq
570 aa
AA seq
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MADVAEEYGINSAVPSLQHSSSRNGTSVSSAAGNGSGPAATTVTTGPRLVRIVKSDSGYG
FNVRGQVSEGGQLRSIHGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVNVEGATH
KQVVDLIRAGERELVLAVLSVPQAETDSLEAADEGPTACCYDYSDKQAVPISIPTYKHVE
QNSEKFVVYNVYMAGRQLCSKRYREFAILHQNLKREFSTYNFSKLPGKWPFSLSEQQLDA
RRRGLEEYLEKVCSIRVLGESDIMQEFLSESDENFNGVSDVELRIAMPDKTTVTVRVRKN
STTDQVYQAVVMRVKMDSITASYFALFEVINHTFVRKLAPNEFPHKLYVQNYTSAVPGTC
LTLRKWLFSAEEEVLLNDNQLAITYCFHQAMEDVKKGSIKVGEKSYQLQKLAEQKKMNIY
LSMLSTCEGYNEIVFPHCACDSRRKGHVVTAVSVHHFKLHACTEDGALENQVIAFEWSEM
QRWDTDEEGMAFCFEYARGEKKPRWVKVFTPYFNYMHECFERVFCELRWRKELEEEVTDK
DNKNCSRDEYLPAAEKQKGWRHLNEEVITS
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgttgcggaagaatatggaattaattctgctgtcccatcactgcagcattcg
tcctctcgtaatgggactagcgtcagttctgcagccggtaacgggagcggacccgcagcc
accactgtaactacaggccctcggctggtccggattgtgaagtcagattcgggctatggc
tttaatgtgcgaggacaagtcagcgagggaggacagctccgaagcatacatggggaattg
tacgctcctctccagcatgtcagcgctgttttgcctggaggtgcggcagatagagcgggt
atctcaaagggtgaccgcattctcgaggtcaatggggtgaacgtggagggagcgacacac
aagcaggtggtggacctgatccgggcaggggagcgggaactggtgcttgccgtgctgtcg
gtgccccaggccgagacggacagccttgaggcggccgacgaaggccccacagcgtgttgc
tatgactacagtgacaagcaggcagtgcccatctccatacccacctacaagcatgtagag
cagaactcagagaagtttgtggtatacaatgtgtacatggcaggcaggcagctatgctcc
aagcgatatcgggagtttgccatcctgcaccagaacttaaagagggagttcagcacctac
aacttctccaaactgccgggaaagtggccgttctccctgtccgagcagcaactggacgca
cgtcgcagaggcctagaggagtacctggagaaagtctgttctataagggtgcttggagaa
agtgacataatgcaagagttcctgtctgaatcagatgagaactttaatggcgtgtcagat
gtggagctgagaatagccatgccggacaaaacgacagtcacagtccgagtccgtaagaac
agcaccaccgaccaggtctatcaggctgttgtgatgagagtcaaaatggatagcatcaca
gccagttactttgcactttttgaagtgattaaccatacatttgtgcgtaagctggcccct
aatgagtttccccataagctgtatgtgcaaaactacacatctgcggtgcctggcacctgc
ctgaccctccgcaagtggctcttcagtgcagaggaagaggtgctgcttaacgacaaccag
ctggccataacctactgcttccaccaggccatggaggacgtcaagaagggatccataaag
gtgggggagaagtcctatcagctccagaaacttgccgagcagaagaagatgaatatttac
ttgagtatgctgagcacgtgtgaaggctacaacgagattgtgttccctcactgcgcgtgc
gactcgaggcgcaaaggccacgtggtcactgccgtcagcgtccaccacttcaagctgcac
gcctgcaccgaggacggcgccctggagaaccaagtgattgcctttgagtggagtgagatg
cagcgctgggacacggatgaggagggcatggccttctgcttcgagtacgccaggggagag
aagaagccacgctgggtcaaggtcttcaccccctatttcaactacatgcacgagtgtttt
gagagagttttctgtgagctcagatggaggaaagagctggaggaggaggtgactgataaa
gacaacaagaactgcagcagagatgaatatcttccagctgctgagaaacagaagggatgg
aggcacttgaatgaggaggtcattacctcttga
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