Sardina pilchardus (sardine): 134083089
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Entry
134083089 CDS
T10667
Symbol
nod1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04621
NOD-like receptor signaling pathway
spil05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
134083089 (nod1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
134083089 (nod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
spil04054
]
134083089 (nod1)
Pattern recognition receptors [BR:
spil04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
134083089 (nod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
CARD
NOD2_WH
LRR_6
LRR_4
AAA_16
NPHP3_N
AAA_18
AAA_22
AAA_30
PIF1
SLFN-g3_helicase
NTPase_1
Motif
Other DBs
NCBI-GeneID:
134083089
NCBI-ProteinID:
XP_062395203
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All DBs
Position
6:complement(25783651..25792126)
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AA seq
944 aa
AA seq
DB search
MFDGRGSDDGAPTGSSALKILTVHRELLVDQVKNTQCILDNLLSSGFVCNEDVEIIQRCT
TKTDQVRHILELVQSKGEEASSYFIHILHEAYDAYIDLRPWFKDIEYKPSEFVQQIPVVN
TDPISKYCEKLRHDLGCDTRFITSYSQREETLLEDLYTDTQMEILNDRNESLGYLDSLDE
LLGDNGVFNEDAETIFVTGDAGVGKSMMLQKLQNLWSKRELNTTAKFFFKFRCRMFSAFK
ETDEISLKDLIFKHNCYPDMDHDNEVFRYILRFPETVIFTFDGYDEIHSDFDLSNVPEVV
SPEERTHPLLVLMNLLCGKLLKGSLKVLTARTGTEVQNKVIRKRVVLRGFSPDHLQRYTA
LHFPDREHLALVTVQLDASPHLGGLCSVPLFCWIIFKSFKHLQSVYDDFELPGSCLTLTS
VFLLLSEVFLSRSSPPGLLKRSTRCTADTFQTGSSMLAAFARLALLGMVENRFVFQQEDV
MSCGLEEDDLQIGYLRPVSHYDACGSPATFEFLHVTLQSFLAAFSLVLDKNSEPTEILKF
FAQCEYRKSYRFPCVSCLGKSRPRDKDPFQNNEHLQFINLFLCGLLSKRNTALLEHLAPP
LSLKKKRAVLKSYLSNSVKLHLRSLPRFKSEKEGTKIHGMSNFLWMVRCIFETNSEDVAR
LTAKGISADHLKLAFCNIYSADCSALNFVLHHHRKGLGVDMDNNNISDYGVKQLRPSFRK
MTVVRLCVNQITDSSIEVLAEELIRYKVVKVLGLYKNQITDKGAKLIAQIIEECPRIHTV
KLGLNKITGIGGKYLASAIKKSKSIFDVGMWGNTIGDEGAEAFAEALKNHTSLTNLSLSA
NGITGQGGRCIAKMLAENSSLHIFWLIGNNISDEAASDLSEAIKMNKGLTHVMLIDNQFT
VSGARLLAEGLSHNTTLKEINLKGNLVSEEEEKEFVAEPRLRFS
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatgggcggggctccgatgatggtgctcccacgggatcttctgctctgaaaatt
ctgactgtacaccgggagctgctcgtggaccaggtgaaaaacacccagtgtatcttggac
aacctcctgtctagcgggttcgtttgtaatgaggatgtcgaaatcatacagcggtgcacc
actaaaacagaccaggtgcgtcacattttggaattggtacagagcaaaggggaggaggcc
tcttcatatttcatccacattctccatgaagcctatgatgcatacattgacctcagaccc
tggttcaaggacatcgaatacaaaccttcggaatttgttcagcaaataccagtggttaat
acagacccgataagcaagtactgtgagaagctgaggcatgacctgggctgtgacacccgc
ttcatcacctcgtactcccaacgagaggagactctgctggaggacctctacacggacacc
cagatggagatcctcaacgaccgcaacgagagcctgggatacctggacagcctggacgag
ctgttaggggacaatggcgtgttcaacgaggacgcagagaccatctttgtcacgggagat
gccggtgtgggcaagtccatgatgctgcagaagctccagaacctctggtccaaaagggag
ctgaacaccaccgcaaagttcttcttcaagttccgctgccgaatgttcagcgcttttaag
gagacagacgagatctctctgaaggatctaattttcaagcacaactgctacccggacatg
gaccacgataacgaggttttccgttacatcctgagattcccagagacggtcatattcacc
tttgatggctacgatgagatccacagcgactttgacctgtcaaacgtcccagaggtggtc
tcgcctgaggaaaggacccacccactgctggttctcatgaacctgttgtgtggcaaactg
ctcaaaggctccctgaaggtgctgacagcccgcactggcacagaggtgcagaacaaagtt
atccgtaagagggtcgtcctcagaggcttctctccagatcacctgcagaggtacacagct
ctgcacttccctgaccgagagcacttggctctggtcaccgtgcagctggatgcgagtccc
catcttggcggcctctgttcagtccccctgttctgctggattatcttcaagagcttcaag
cacctccagtcggtgtatgacgactttgagctgccgggttcctgcttgaccctcaccagt
gtctttctccttctgtcggaggtcttcctcagtcgctcctcacctccgggcctgctgaag
aggagcaccaggtgcacggctgacaccttccagacgggcagcagtatgttggcagccttt
gcccgcctggccctcttgggcatggtggagaacagatttgtgttccagcaggaggacgtg
atgtcttgcggattggaggaggatgatttgcagattgggtacctcaggccggtcagccat
tacgatgcctgtggaagtccagctaccttcgagtttctccacgttaccttgcagtccttc
ctggctgctttttctttggtgctggacaagaactctgagcccacagagattctgaagttt
ttcgcccagtgtgagtacagaaagagttaccgcttcccatgtgtgtcctgtctgggcaag
tctcgtccgagagacaaggatccctttcagaacaacgagcatctgcagttcatcaacctg
ttcctgtgcggcctcctgtcaaagcgaaacacggctctgctggagcatctggcgccgccg
ctgtccctgaagaagaagcgagccgtgctcaagtcctacctgtccaacagtgtgaagctg
cacctgcgcagtcttccccgcttcaagtcggagaaggagggaaccaagattcacggcatg
tccaacttcctgtggatggtgcgctgcatctttgagacaaacagtgaggacgtggctcgt
ctgactgccaaggggatatcggcagaccacctcaagctggccttctgtaacatctactca
gccgactgcagcgctctcaactttgtgctgcatcatcaccgcaagggccttggagtggac
atggacaacaataacatcagtgactatggagtgaagcagctgaggccaagcttcagaaaa
atgacggtggtgcggctgtgtgtcaatcagatcacagacagcagcattgaggttcttgca
gaggagctgattcggtacaaagtagtcaaagttctggggttgtacaaaaaccaaataacc
gataaaggtgccaagctgattgcccagatcattgaggagtgtcctcggatccatacagta
aagcttggcctcaacaaaatcactggcatcggtggaaagtacctagcctctgcgataaaa
aagagcaagtccatatttgacgtaggcatgtggggaaacaccattggggatgagggagca
gaggccttcgctgaggctttgaagaatcacacaagcctaaccaacctcagcctctctgct
aatggaatcactgggcaaggagggaggtgcatcgctaaaatgctggcagagaactccagc
cttcacatcttctggctgattgggaacaacatttcagatgaagcagcatctgatctttca
gaggccatcaagatgaacaaaggactcactcacgtcatgttaattgataaccagttcact
gtgagcggagccagactcttggcagagggcctgtctcataacacaactctaaaggagatc
aacctgaagggaaacctggtctcggaggaggaagagaaagagtttgtcgctgaaccaagg
cttcgcttcagctga
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