Sardina pilchardus (sardine): 134083328
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Entry
134083328 CDS
T10667
Symbol
trim71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71 isoform X1
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spil03019
]
134083328 (trim71)
04121 Ubiquitin system [BR:
spil04121
]
134083328 (trim71)
Enzymes [BR:
spil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134083328 (trim71)
Messenger RNA biogenesis [BR:
spil03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
134083328 (trim71)
Ubiquitin system [BR:
spil04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
134083328 (trim71)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
ANCHR-like_BBOX
SGL
zf-RING_5
zf-C3HC4
zf-RING_2
zf_RING_Vps8_fungal
Ig_GEX2_N
Invasin_D3
DUF4094
Motif
Other DBs
NCBI-GeneID:
134083328
NCBI-ProteinID:
XP_062395606
LinkDB
All DBs
Position
6:complement(33932950..33958340)
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AA seq
837 aa
AA seq
DB search
MVKLHCVDRSIEMSYEGYSMLSSITRLPWHLRDTDLQTCPLCKELCGSSAPISSNSSTSS
SSSQTSSSSTSSSRRLHVLPCLHAFCRQCLEGQRNPGDPLKLRCPTCDQKVSMSESGVDA
LPSSNFLFNNLLDVVVASEEQNKTNCRINPHSSLLRPHHLTEPQCSSCDEGNPATSHCLD
CQEYLCDNCVRAHQRVRLTKDHFIERLLESLHIGGRTNNSNTPVSLSQSFHSTYSFLPVF
QERMDFCQQHDNAVLRFFCDSCSVPICRECSAGRHAGHSFTYLQDAVQDCRALTIQLLAD
AQQGRQAVQLSIEKAQAIAEQVELKAKVVQTEVKTITLRHKKTLEERECELLWKVEKIRQ
VKAKSLYLQVEKLHQNLTKLDSTIATVQQVLEEGGSLDVLLAREHMLAQMEELKALRCLL
QPQEDDRIVFTPPDQALFIAIKSMGLISSGAYASASKAHGEGLKRGLQGKVASLTVVGYD
HDGEPRLSGGDGVSAVLMGPDGALSSADVSDHQDGTYTVSYLPKSEGEHLLSVLICNQHI
EGSPFKVLVKSGRSYGGVGLPMASFGGEGDGDGQLCRPWGICVDKEGFVVVADRSNNRVQ
IFKPCGAFHHKFGTLGSRPGQFDRPAGVACDSQRRIIVADKDNHRIQIFTFEGQFFLKFG
EKGTKNGQFNYPWDVAVNPEGKILVSDTRNHRVQLFGPDGTFLNKYGFEGALWKHFDSPR
GVAFNQEGHLVVTDFNNHRLLVIRPDCQSARFLGSEGTGNGQFLRPQGVAVDQEDRIIVA
DSRNHRIQVFEANGNFLCKFGTQGNGFGQMDRPSGIAVTPDGMIVAVDFGNNRILMF
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggttaaactgcactgtgtagatcggagcatcgaaatgagctatgagggatattccatg
ctgtcatcgattacaagactaccatggcatttaagagacaccgacctgcaaacatgcccc
ctgtgcaaggagctgtgcgggtcttctgctccgatctcctccaactcctctacctcatcg
tcctcatctcagacctcaagttcatctacctcatcttccagaaggctccacgtactcccc
tgtctacatgcattctgtaggcagtgcttagagggccagcggaaccccggcgacccactg
aaacttaggtgcccaacttgtgaccaaaaggtttccatgtccgaatccggggtagacgcc
ttgccatcctcaaattttctcttcaacaacttacttgatgttgtagttgcgtccgaggag
caaaacaagactaactgcagaatcaacccacacagtagccttcttcgaccacatcacctc
accgaacctcaatgcagttcctgcgatgagggcaatcccgctacctcacattgcttggac
tgccaagagtacctctgcgacaactgtgtccgggcgcaccagcgggtccgtttaaccaaa
gaccattttattgaaaggttactggagagcttgcacattggaggccggaccaacaactcc
aacactccggtgagcctctcccagtcgttccattcgacctactcgtttctgcccgtcttt
caggagcgaatggatttctgccaacagcacgataacgcggtgctgcggttcttctgtgac
agctgctcggtgcccatctgccgggagtgcagtgctgggcggcacgccggacacagcttc
acctacctgcaggacgccgtgcaggactgccgcgccctcaccatccagctgctcgccgac
gcccaacagggacgccaggctgtgcagttgagcattgagaaggcccaggcgatcgccgag
caggtggagctgaaggccaaggtggtgcagacggaggtgaagaccatcaccctgcgccac
aagaagaccctggaggagcgcgagtgtgagctcctgtggaaggtggagaagatccggcag
gtgaaggccaagtccctgtacctccaggtggagaagctccatcagaatctgaccaagctg
gacagcaccatcgccacggtgcagcaggtgctggaggagggcgggagcctggacgtgctg
ctggcgcgcgagcacatgctggcgcagatggaggagctcaaggcgctgcgctgcctgctg
cagccgcaggaggacgaccgcatcgtcttcacgccgcccgaccaggcgctcttcatcgcc
atcaagtccatgggcctgatcagcagcggcgcctacgcctccgcctccaaagcccacggc
gagggcctgaagcgcggcctgcagggcaaggtggcctccctcaccgtggtgggctacgac
cacgacggcgagccccggctgtccggcggagacggcgtctcggccgtgctcatggggccg
gacggggccctgtccagcgccgacgtctcggaccaccaagacggcacctacacggtcagc
tacctgcccaagagcgagggcgagcacctgctctccgtgctcatctgcaaccagcacatc
gagggcagccccttcaaggtgctggtcaagtcgggccgcagctacgggggcgtggggcta
cccatggcctccttcgggggcgagggcgacggggacgggcagctgtgccgcccctggggc
atctgcgtggacaaggaagggttcgtggtggtggccgaccggagcaacaaccgcgtccag
atcttcaagccgtgcggcgccttccaccacaagttcggcaccctgggctcgcggccgggc
cagttcgacaggccggccggcgtggcctgcgacagccagcgcagaatcatcgtcgcggac
aaggacaatcaccgcatccagatcttcacgttcgagggccagttcttcctcaagttcggc
gagaagggcaccaagaacgggcagttcaactacccctgggacgtggccgtgaacccagag
ggcaagatcctggtgtccgacacgcgcaaccaccgcgtgcagctcttcggccccgacggc
acgttcctcaacaagtacggcttcgagggggctctgtggaagcattttgactcgccgcgc
ggcgtggccttcaaccaggagggtcacctggtggtcactgacttcaacaatcaccgactg
ctcgtcattcggcccgactgccagtccgcacgcttcctgggctcagagggaacgggcaat
gggcagttcctccgtccgcagggggtggctgtggaccaggaggaccgcatcatcgtggct
gactcccgcaaccatcgcattcaggtgttcgaggccaacggcaatttcttatgcaagttc
ggcactcagggcaatggctttgggcagatggatcgcccatcgggtatagctgttacccct
gacggaatgattgtcgccgtggactttggtaacaaccgaatcctcatgttctaa
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