Sardina pilchardus (sardine): 134083346
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Entry
134083346 CDS
T10667
Name
(RefSeq) green-sensitive opsin-3-like
KO
K04250
rhodopsin
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
134083346
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
spil04030
]
134083346
G protein-coupled receptors [BR:
spil04030
]
Rhodopsin family
Vision
Opsin
134083346
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
Rhodopsin_N
7TM_GPCR_Srw
7TM_GPCR_Srv
Serpentine_r_xa
Motif
Other DBs
NCBI-GeneID:
134083346
NCBI-ProteinID:
XP_062395637
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All DBs
Position
6:34492798..34494533
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AA seq
345 aa
AA seq
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MNGFEGDNYYIPMSNRTGLVRNPFEYEQYYLGDPWQYKFLAFYMFCLICTGFPINGMTLL
VTALHKKLRQPLNYILVNLAVAGMIMVLFGFTITITSAVNGYFYFGPMGCAVEGFMATLG
GEVALWSLVVLAVERYIVVCKPMGSFKFSDTHALAGIAFTWVMAMSCAAPPLVGWSRYIP
EGLQCSCGPDYYTLNEKYNNESYVIYMFVVHFFLPVIVIVFTYGSLVCTVKAAAAAQQES
ASTQKAEREVTRMCVLMVVGFLVAWTPYATVAAWIFFNKGAPFTAQFMAIPAFFSKSSSI
FNPCIYVLLNKQFRSCMLSTVFGKAMEDETSVSTSKTEVSSVGPA
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaatggatttgagggtgacaactactacatacctatgtccaaccggacagggttggtg
aggaatccttttgaatacgagcagtactacctcggggatccttggcaatacaagtttctt
gctttctacatgttctgcctcatctgcactggcttccccatcaatggcatgactcttctg
gtcacagcgctgcacaagaaacttcgacaacctcttaactatattctggttaacctcgct
gtggctggtatgatcatggtactctttggtttcacgattaccatcacttctgcagtaaat
ggctatttctattttggacccatgggctgtgctgtggagggcttcatggcaaccctagga
ggtgaagtagctctttggtcactggtggttcttgctgtcgaaagatacattgttgtgtgc
aagcctatgggaagcttcaaattctctgacactcatgccctggcgggaatagcattcacc
tgggtcatggctatgtcctgtgcggcccccccactggttggctggtcaaggtacatccct
gagggcctgcagtgctcctgtggaccagactactacaccttgaacgaaaagtacaacaat
gagtcatatgtcatctacatgtttgttgttcacttcttcctccctgtcattgtcatcgtc
ttcacttatggcagcctcgtgtgcacagtcaaggcggctgcagcagcgcaacaggaatca
gcttccacacagaaggctgagagggaggtgacacggatgtgcgtcctgatggtggttggc
ttcctggtagcttggacaccttatgccactgtggcagcctggatctttttcaataaggga
gctcctttcactgcccagttcatggccatccctgccttcttctccaagagctcatcaata
ttcaacccttgcatctatgtacttttgaacaagcagttccgaagctgcatgctctctacc
gtctttgggaaagctatggaggatgagacctctgtttcgaccagcaagacagaagtatcc
agtgtgggcccagcataa
DBGET
integrated database retrieval system