Sardina pilchardus (sardine): 134087087
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Entry
134087087 CDS
T10667
Symbol
asxl1
Name
(RefSeq) putative Polycomb group protein ASXL1 isoform X1
KO
K11471
additional sex combs-like protein
Organism
spil Sardina pilchardus (sardine)
Pathway
spil03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
134087087 (asxl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spil03036
]
134087087 (asxl1)
Chromosome and associated proteins [BR:
spil03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
134087087 (asxl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASXH
PHD_3
Motif
Other DBs
NCBI-GeneID:
134087087
NCBI-ProteinID:
XP_062396296
LinkDB
All DBs
Position
7:complement(2727479..2747748)
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AA seq
1710 aa
AA seq
DB search
MLHSQVRGDRVKNSIFFKLPGRMSLFTLKKNALQWTKSPTATEGADAAATATQATASTAT
VGTAEGAEQESCDSTETAAASGENDASVDETSSSASCSTEPQTRLSRSSQSGRQRKKSVM
MPRVVLTPLKVNGEHVPSGAQGRRREGTRGGSGPTLRAHSELGWKRPQHFKSMRGLRSGP
MKRSRGVEVDFETPGSILVNTNIRALINMRTFAAFPPHSQQQLLQLLPEVDRQVGPDGLP
RLSSSALNNEFFTHASQSWKERLAEGEFTHEMQVRFRQEMEKEKKVEAWKEKFFEEYHGQ
RSGLTHEEALKLTMSDPGDEAAAVLDRDTAAVATPKRRSVGRRRREGRIRRRSRADLRRR
ARRTLCKTSPAAAAASAAEQAESAEPSDDGAATAATPDDAPSTPLPEAAAAAAVQGEVVL
PADSEMETPVEVPSPEAAPSSPVPEPVPTPASTVSSDEPEASEVSARLLPDVPEPPVAST
SSPSSSSSTSSSSSPSSSPSSASDRQGAFAASSDSSSSSSSSSSSSSSTAAIATDPLDDG
ASVITTGTAGTGASSRESSPAASPATSSTSAGLSKEQKRRPDEPQAFTSFPEKRPRLDER
QSFRNTVDCVHSEKPQPTTEEPKVPPIRLSRIKPPWVKGAPTYQICPRIVPPNEGSGGRR
SGTGARTLADIKARAQQARAQREAAAAVAATGDGAGPGGGGPGGGSGLPDRSSGRRTREH
PGPVEPGGGGGGAGAEMEEQSSPASSHSSGAQLQLSAVDSERTAMTTTTASSASSASSSA
TTTAASTPKAHAPSPSTSSNPSFPPSEPPQTPTPSPSVGGSPVSQAQTEELSPGEDKLSA
SPSDKASDDAEPDTPKQIPTEPESVGSVPDGSSTEEADSNDGGPPPESSPSPPAMEKGPS
GAVSLMPTSIPDSLPRFGAQGVDVIRTRTAVGSQAWEAEPQSGHEQRSALAGVIQHGSDV
KPPQETPTVVSRNGLSEEEGGGRGERGLRCGAEVGLDSKPVAAFENSVAHLSGIAGDDDA
GGHSDSTETASDFENEAPEEESVDWHTSTPADCNGVALQSGAKPQNQPVIQSPTRLMSRT
FSPPPQHQQQPVIHSHVSNPGQCQSVIQQTRFPNGVQNQPVIQTQKQQQQQQQQQPSSQQ
QHPSRGAHVSNHILDQASSTGLQGMGHTHLAQAERDQNRNNGKSVIQTEASDEAKFLRRM
SAEDKSGSVQQVKKPAGSARPMSSVEANNPLVTQLLQGSLPLEKVLPQPHSASKLEINRL
PGSPTVSQQQIGRHPPAGPQPRGAASGPRFRSPSDSSSSGPTDSPGPEFSPPPSQHKLPP
GTRGSPGPGRGYGPQVPGSMPSRAACLFEEAKRLPPGAVPVITSLPSSLSMSSSLSSSSS
SGRRPPLDVTSQSAYESAVIKELPGQQQQQPMRGGTPERPGMFQQQHSNSLGPPHSRTTT
PDAPSPPHGDLCPSEVVPTVKINWRPTKAPPPHPPQPYQQQQLSPVAAVKNEVSSRPSCQ
ALTKNPPGGGNGPATAAPPPAAVITKKEPPSSMDSFLSGGAMEGLLNMEMSLVRMAKKEQ
GRSPYGRQGDLSSPISSSSPSSAASSLPFQLYGKPPKLQQSTGGGSGVGGFSYTANVSVV
DGSGFSRSIADSVLHLRQRAGTGNGGLGGVGVGQSAALSIQAFADSAAEEVALKCSCRLK
AMIMCQGCGAFCHDDCIGPSKLCVSCLVVR
NT seq
5133 nt
NT seq
+upstream
nt +downstream
nt
atgcttcactctcaggtgcggggcgaccgagtgaagaacagcatcttcttcaagctccca
ggcagaatgagtctcttcaccctaaagaaaaatgcccttcagtggacaaagagccccaca
gcgacagagggtgcggatgctgctgcgacagctacccaggcgaccgcatccacagccaca
gtcggcacggcagagggggccgaacaggagagctgcgactccacggaaacggctgctgcc
agcggtgagaatgacgcctcggtggacgagacgtcctccagcgcctcctgctccacagaa
ccccagacccggctcagccgatcctcacagtccggcagacagagaaagaagtcggtgatg
atgcctcgcgtcgttctcactccactcaaggtcaacggagagcacgtgccatcaggagcc
caggggaggcgcagggaaggcactagggggggttcgggccccacactgcgtgcccactcc
gagctgggctggaagcgcccccagcacttcaagagcatgcgtggcctccgctcaggaccc
atgaaaagaagccgaggagtagaagtcgatttcgagaccccaggatccattctggtgaac
accaacattcgagcactcataaacatgcgcaccttcgctgccttccccccacactcccag
cagcagctgctacagctcttacctgaggtcgaccgacaggttggccccgacggactacct
cgcctcagtagttcagccctcaataatgagtttttcacacacgcctcacaaagttggaaa
gagcgattggccgaaggtgagtttacccatgaaatgcaggtgcgcttcaggcaagagatg
gagaaagagaagaaagtggaagcatggaaagagaagttctttgaggagtaccatggccaa
cggtctggcctgacacacgaggaggccttgaaactgaccatgagtgacccaggggacgaa
gcagcggccgtgctggacagagacacggctgccgtcgccacgccgaagcgccgcagtgtg
ggccgccggcgccgggagggccgcatcaggcgccgctcacgagcagacctgcgtcgccgg
gcccgacggaccctctgcaagaccagtcccgccgccgccgccgcttccgcagccgagcaa
gcggagagcgccgaaccctcggacgacggtgccgccaccgccgccactcctgacgatgcc
ccctccacgccgctaccggaggccgccgcagccgctgccgtgcagggcgaggtggtcctg
cccgccgactcagaaatggagacccctgtcgaggtcccttccccggaggcggccccctcc
tcccccgtcccggagcccgtcccgaccccggcctccaccgtgtccagcgacgagcccgag
gcgtccgaggtctccgcccggctgctgcctgacgtgcccgagccccccgtggcctccacc
tcctcgccctcctcttcgtcttccacctcctcgtcctcgtcgccctcttcgtcgccctcc
tccgcctccgaccgccagggagccttcgccgccagctcggactcctcctcctcctcgtcc
tcttcatcgtcgtcgtcctcctccacggccgccatcgccaccgacccgctggacgacggc
gcgtccgtcatcaccaccggcacggcgggcaccggcgccagcagcagggagagcagcccg
gccgccagccccgccacctccagcacctccgccggcctgtccaaggagcagaagaggcgc
cccgacgagccccaggccttcaccagctttcccgagaaacggccgcggctcgacgagcgt
cagtcctttcgtaacacagttgactgtgtccactcggaaaagccgcagcccacaaccgag
gaacccaaggtcccgccaatccggctctcccggatcaaaccgccctgggtcaagggggcg
ccaacgtaccaaatctgtccccggatcgtgccccccaacgaggggtcgggggggcggcgg
tccgggacgggggcgcggacgctggcggacatcaaagcccgcgcccagcaggcccgtgcc
cagcgagaggccgctgctgctgttgcagccactggcgacggggcagggcccggcgggggc
ggcccggggggcggttctgggctaccggatcgcagcagcgggcggcggacccgagagcac
ccggggccggtcgagccgggaggaggcggcggcggcgcgggggccgagatggaggagcag
agctcacctgcgagctctcattcgtctggagcacaactacagctgtccgctgtagactcg
gagaggaccgcgatgaccaccaccacggcgtcgtcggcgtcatcggcgtcatcgtccgcg
acaaccacggccgcctccacgcccaaggcccacgccccgtctccgtccacctcctccaac
ccgtcgtttcctccgtcggagcctccgcagacccccacgccgtccccgtcggtagggggc
agccctgtctcacaggcccagacggaggagctctcgccgggggaggataagctctcggcc
agccccagcgacaaggcctcggacgacgctgagccggacactccaaaacagatccccacc
gagccggagtcggtgggcagcgttccggacggctcctccacggaggaagccgactcgaac
gacggcgggccgccgccggagagcagtccgtcgccgccggcgatggagaaggggccgagc
ggggcggtgtcgctaatgcccacgtccatcccggactccctgcccaggttcggagcgcag
ggggtggacgtgatcaggacgcggacggccgtcgggagccaggcctgggaagccgagccg
cagagcgggcacgagcagcggtcggcgttggccggcgtcatccagcacggatcggacgtc
aagccaccgcaggagacccctaccgtggtgtccaggaacggactgagcgaggaggagggc
ggcggcaggggcgagcgagggcttcgctgcggcgctgaggtcgggctggacagcaagccc
gtcgcagccttcgagaactccgtcgctcacctctccggcatcgccggggacgacgacgca
ggggggcacagcgactccacggagaccgcctccgatttcgagaacgaggccccggaagag
gagtcggtggactggcacacgtcgacgccggccgactgcaacggcgtggcgctccagagc
ggcgccaagccgcagaaccagccggtcatccagagccccacgcggctgatgtcccggaca
ttcagcccgcctccccagcaccagcagcagccggtgatccactcccacgtgtccaaccct
ggccagtgccagtcggtcatccagcagacccgcttccccaacggtgtccagaaccagccc
gttattcaaacccagaaacagcagcagcagcagcagcagcagcagccgtcgtcacaacaa
cagcatcctagccgcggtgctcacgtctcaaaccacatcctggaccaggcgtccagtacg
gggctgcagggcatgggtcatacgcacctggcccaggcggagagagaccagaaccgtaac
aacgggaagtccgttatccaaaccgaagcgtccgacgaagccaaattcctccggcggatg
tcggcggaggacaagtccggctctgtccagcaagtcaagaagccggcgggctcggcacgg
ccgatgtcgtcggtggaggccaacaacccgctggtcacccagctgctccagggcagcctc
ccgctggagaaggtgctgccgcagccgcactcggccagcaagctggagatcaaccggctc
cccgggagccccacggtgtcccagcagcagatcggccgccacccgcccgccggacctcag
cctcgcggcgccgcgtctggccctcgcttcaggagccccagcgactcctcgtcgtctggc
cccacggactcccccggccccgagttctcccctccccccagccaacacaagttgccccct
ggcacgaggggctctccggggcctggccgcgggtacgggccgcaggtgcccggctccatg
ccgtcacgggcggcgtgcttgttcgaagaggccaagaggcttccgccgggcgccgtgccg
gtcatcacgtccctcccctcgtccttgtccatgtcctcgtcgttgtcttcctcctcctcc
tctggtcggcgtcctccgctggacgttacctcgcagagcgcttacgagtcggcggtgatc
aaagagctccccgggcagcagcagcagcagcccatgcggggcggaactccggaacggccc
ggaatgttccagcagcagcactccaacagcctcgggccgccgcactcccgcacgaccacg
ccggacgcgccgtcccctccccacggcgacctctgcccctccgaggtcgtccccaccgtc
aagatcaactggcggcctaccaaagccccgcccccccaccctcctcagccctatcagcag
cagcagctgtctccggtcgccgcggtgaagaacgaggtttcgtcgcgcccctcttgccag
gcgctcaccaaaaaccccccaggaggaggaaacggccccgcgacggccgccccacctcct
gctgctgtgataaccaaaaaggagccgccgagctccatggacagtttcttgagcggcggc
gccatggagggcctgctcaacatggagatgtcgctggtgcgcatggccaaaaaggagcag
ggccggagcccgtacggtcgccagggcgacctctcctcgcccatctcgtcgtcgtcgccg
tcctccgccgcctcgtcgctgcccttccagctgtacggcaagccgcccaagctgcagcag
agcacgggcggcggcagcggcgtcggcgggttcagctacacggccaacgtgtcggtggtg
gacgggagcggcttctcgcggagcatcgccgacagcgtgctccacctgcggcagcgcgcg
ggcaccgggaacggcgggctcggcggcgtgggcgtgggccagagcgcggcgctcagcatc
caggcgttcgccgacagcgccgccgaggaggtggccctcaagtgctcgtgcaggctcaag
gccatgatcatgtgccagggctgcggtgccttctgccacgacgactgcatcggcccatcc
aaactgtgtgtgtcctgcctggtggtcagatag
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integrated database retrieval system
