Sardina pilchardus (sardine): 134087139
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Entry
134087139 CDS
T10667
Symbol
l1cama
Name
(RefSeq) neural cell adhesion molecule L1.2 isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
134087139 (l1cama)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
spil04515
]
134087139 (l1cama)
04090 CD molecules [BR:
spil04090
]
134087139 (l1cama)
04091 Lectins [BR:
spil04091
]
134087139 (l1cama)
Cell adhesion molecules [BR:
spil04515
]
Immunoglobulin superfamily
L1 family
134087139 (l1cama)
CD molecules [BR:
spil04090
]
Proteins
134087139 (l1cama)
Lectins [BR:
spil04091
]
I-type lectins (Siglecs)
134087139 (l1cama)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
fn3
ig
Bravo_FIGEY
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
Ig_5
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
134087139
NCBI-ProteinID:
XP_062396405
LinkDB
All DBs
Position
7:5347901..5393938
Genome browser
AA seq
1295 aa
AA seq
DB search
MPTSAPGQPVGSRGRCTPLHLRPLLPLLLLLLAHTTSRPAQAAIDIPPNYQIPDFKKPPE
ITAQPESITAFSSDIMLTCEASGNPKPTFRWVKDGVEFDLSSDPDLRVTPGSGTFSVAAE
DQPISQYSGKYTCFASNELGTAVSNEVQITTENPPTMQKEKKVKMKVEAGESVVLACNPP
ASSIPPNIHWMDERLHHIKLNERVVQGLDGNLYFAHTEVEDSRNDYTCNMRYARIMFSKE
PISLIVNRSNSVARNRRPQMLRPTGSKSSHHVLRGQTLSLECIAQGLPTPNIQWVRTDGE
MSESRILKKNSGTLLHFSDVQEGDGGQYQCTASNTQGSATHVYTVSVEAAPYWKKEPQSQ
LYAPGETVRLDCEADGIPRPQVAWSINGNPLSEVDPNPRLSVRAGGLTLKNVHYSDTAVF
QCKATNKHGSIVTNTYVYVIELPPQILTPNDERYPVIEGQTAELECKTFGSPRPDVKWES
EYSYTPLSPPRVTQLSRGALRIANASSSDGGLYTCSVRSTNLSVSATLEVFNRTVIISPP
LELRVQRGKPAIFTCIAKVDPRLDYQLQWRRGRQKLSGSSIDDKYTFEDPDLIVADVQEE
DEGDYTCEIITNLYTAKASGSITIVDFPDPPSRPQFNNLKDHSVTLSWTPGDDHNSPVIE
YVVEAEVTGVETDDWKVLTRVAADTLRANVDMRPFLSYRFRVLAINDVGMSKPSPASAAH
STPAAAPDSNPAGVRSESVDPDTLVITWEEMDRQSFNGPEFQYKVLWRRVVGAGPRWSHN
FTTAPPYVVEGVGDFIAFDIKVQAVNEIGPAPDPAPTIGYSGEDVPLEPPMNVAVEVINS
TTVKVTWAAINKDTVRGHLLGYKIHLQKHGQTRHHREEPARRGRELPREVVLSTGPNEQK
KTLRDLQPYSHYECSASVFNSKGEGPVSEPITFSTPEGVPSPPVSLELDSPSETEMTLHW
LPPAQPNGVLKGYLLQYQRIVVTEDSPMQVISIDDPTVTSETLRQLDPHSHYRFHVRGRT
SKGEGPAVTREGATTLDGAPPSNINISVGEHSVNFSWPSRERHRSVGFHVRYLNKNGWGK
GWKRSERLDSSQSFYQLQGLQPGSQYRLELVYNNTPYWDSEIQTEGAAGVMPVKSGFATE
GWFIGLVSAIALLVLLLLILCFIKRSKGGKYSVKDKEEGHIDSEARPMKDETFGEYRSLE
SDNDEKRTASQPSLCDDSKLCSDDGNLDDYGNSHSVQTEVIMDESLASQYSGGVSGGGGV
RDGPETEAPDGSPPLAPPAYTPTNHGLPNSSPFLG
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccagcgcgccaggacagccggtcggcagcagggggcgatgcacacctctgcac
ctccgccctctcctccccctcctcctcctcctcctggcccacaccaccagcagacccgcc
caggctgccatcgacattcccccgaactaccaaatacccgactttaaaaagcctccagag
atcactgcccagccagagtcaatcactgccttctcctcagacatcatgctcacctgcgag
gcttctgggaatcccaagcccactttccgatgggtgaaagacggagtagaattcgacctc
tccagtgaccctgatctgagggtgacgccaggttccggaacattctcggtggccgcagaa
gaccagcccatcagccagtacagtggcaaatacacgtgtttcgcctctaatgagcttggc
actgccgtctccaacgaggtccagatcactacggagaatcctcccaccatgcagaaagaa
aagaaggtgaagatgaaggttgaagccggagagagtgtggtcttagcctgcaatcctcca
gccagtagcattcctccaaatatccactggatggacgagaggttgcatcacattaagctc
aatgagcgtgtggtgcaaggccttgatggaaacctgtacttcgcccacaccgaggtggag
gacagccgcaatgactacacctgcaacatgcgctacgcccgcatcatgttctccaaagag
cccatctccctcattgttaaccgctctaattcagtggcgcggaaccgaaggcctcagatg
ctgagacccacgggctccaagagctcgcaccacgtcctgcggggtcagaccttgagcctg
gagtgtatcgcccagggcctcccgacccccaacatccagtgggtccggacggacggggag
atgtcagagtcgcgcatcctcaaaaagaacagcggcacactgctgcacttcagcgatgtg
caggagggcgacgggggccagtaccagtgcacggccagcaacacccagggctcggccact
cacgtctacaccgtctctgtggaggcggcgccgtactggaagaaggagccccagagccag
ctgtacgccccgggagagacagtgcgtctggactgcgaggccgatggcatcccccgtccc
caagtggcctggagcattaatggaaatcctctctcagaggtagacccgaaccccaggctc
agtgtgcgcgcaggtggcctcaccctgaagaacgtgcactacagcgacacggccgtgttc
cagtgcaaggccaccaacaagcacggcagcatcgtgaccaacacctacgtctacgttatc
gagctgcctccgcagatcctgactccaaacgacgagagatacccggtcatcgagggacag
acagcagagctggagtgcaagacctttggatcaccacggcctgatgttaaatgggagagc
gaatactcctataccccgctgtcacccccgcgagtgacccagctgagtcgaggtgccctc
cggatcgccaacgcgtccagcagcgacggcggcctctacacctgctccgtccgctccacc
aacctctccgtcagcgccacgctggaagtgttcaacaggaccgtgatcatctccccgcct
ctggagctgcgggttcagcggggcaagccggccatcttcacctgcatcgccaaggtggac
cccaggctggactaccagctgcagtggcggcggggtcgccagaagctgtcgggctcgtcc
atcgatgacaagtacacatttgaggatcccgacctcatcgtggcagacgtccaggaggag
gatgaaggggactacacctgcgagatcatcacaaatctgtacacggcaaaggccagtggt
tccatcaccatagttgactttccggaccccccatctcggcctcagttcaacaacctgaag
gaccacagtgtgaccctcagctggactccaggagatgaccacaacagccctgtcatagag
tacgtggtggaggctgaggtgacgggggtggagacggacgattggaaggtgttgacgcgc
gtggcggccgacacactgcgtgccaacgtggacatgcgacctttcctgtcctaccgcttc
cgggtcctggccatcaacgacgtggggatgagcaaaccaagccctgcctcagcagcacac
tctacccctgcagcagcgccagacagcaatccggcgggtgtgcggagtgagtctgtggac
cctgatacgctcgtgatcacatgggaggagatggacaggcagagcttcaacgggcctgag
ttccagtacaaggtgctgtggaggcgggtggtgggcgctggccccaggtggtcgcacaac
ttcaccacggcgccgccgtacgtagtcgagggggtcggcgacttcatcgccttcgacatc
aaagtgcaggcggtcaacgagatcggcccggctccggaccccgcgcccacaatcggctac
tctggggaagacgttcccctggagcctcccatgaatgtcgctgtggaggtgatcaacagc
acgaccgtcaaggtcacctgggccgccatcaacaaggacactgtcagaggtcacctgctt
ggctacaagatccacctgcagaaacacggccagacccggcaccaccgcgaggagccggcc
cggcgggggcgtgagctgcccagggaggtggtgctgtccacgggccccaacgagcagaag
aagacgctgagggacctgcagccgtactcacactacgagtgcagcgccagcgtcttcaac
agcaaaggagagggaccagtctccgagcccatcaccttctccacgccagagggagttccc
agtccaccagtgtcccttgagctggacagcccatctgagacggagatgactctgcactgg
ctgcctcctgcccagcccaacggggtgctgaagggctacctgctgcagtaccagaggatt
gtggtgacggaggacagccctatgcaggtcatttccattgacgaccccacggtcaccagc
gagaccctaaggcagctggacccccacagccattaccgcttccatgtgcgggggcgcacc
agtaaaggggagggtccagccgtcaccagggagggggccacaacactggatggagctcct
ccatccaacataaacatttctgtcggagagcattctgtgaacttcagttggccctcacgg
gagagacacaggagcgtgggcttccatgtccgctacctcaataagaacggctggggcaaa
gggtggaagaggtcggagaggctggactcttctcagtccttctaccagctgcagggcttg
cagccgggctcccagtatcgactggagctcgtctacaacaacacgccctactgggacagc
gagatccagacggagggagcagcgggtgtgatgccggtgaagtcgggcttcgccacggag
ggctggttcatcgggttggtgagcgccatcgcactgctcgtgctgcttctgctcatcctc
tgcttcatcaagaggagcaaaggggggaagtactcagtcaaagataaagaagagggtcac
atagactctgaagcccgacccatgaaggacgaaacatttggagagtacagatccctagaa
agtgacaacgacgagaagcgcaccgccagccagccgtccctgtgcgacgacagcaagctg
tgcagcgacgacggcaacctggacgactacggcaacagccacagcgtgcagacggaggtg
atcatggacgagtcgctggccagccagtacagcggcggcgttagcggtggtggcggcgtt
cgcgacgggcccgagaccgaggccccggacggctcgccacccctcgccccgcccgcgtac
acccccaccaatcacgggctgccaaattcatcgcccttcttaggttaa
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integrated database retrieval system
