| Entry |
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| Symbol |
samhd1
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| Name |
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
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| KO |
| K22544 | deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-] |
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| Organism |
spil Sardina pilchardus (sardine)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:spil00001]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
134087277 (samhd1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
134087277 (samhd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:spil03400]
134087277 (samhd1)
DNA repair and recombination proteins [BR:spil03400]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
134087277 (samhd1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
7:9450361..9470189
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| AA seq |
654 aa
MDSRKRPREDLARNSTDNFKTPEKRVSVVPRRGKSSTQSDVDFRNWDIDTTCSYLRREGL
EEWEGKFKEHQITGVGLRYLTEAQLEKIGIGPLGKRLQILHSLQKLWQITSVPMKVFNDP
IHGHIELHPLLVCIIDTPQFQRLRYIKQLGGTYMVFPGASHNRFEHSVGVGYLAGRLVQA
LNERQPELLITKQDILCVQIAGLCHDLGHGPFSHMYDGMFIPKVRPDCKWKHEMASVKMF
DHLVKENGLEPVMREHGLTLPDDLVFIKEQIAGPLENHAPARKGQAPVSCHGNPMAWPYK
GRPEEKSFLYEIVANKRNGIDVDKWDYFARDCYHLGIQNNFDYRRFLKFARVCDVKGTKH
ICTREKEVGNLYDMFHTRNCLHRRAYQHKVGNIVETMITEALVKADPYIQIQGSGGKMFT
LSTAIDDMDAYTKLTDNVFEQILYSSTEELAEAREILQNIICRRLYKCVGQTHPTNHMDV
SQGKLLEWAKDVARSKPSGTDVEFQGEDFVVNVIHMDYGMKGKNPINNVRFYCKNDPTKA
IKIRKNQVSQLLPEKFAEQLIRVHCKRTDERSLEAAKKYFVQWCMDMNFTKPQDGDVTAP
ELTPLKASWASTDNDDDDDDDDDDDDEDEGISYPASKHSTPQNGDLKVKTRLAL |
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| NT seq |
1965 nt +upstreamnt +downstreamnt
atggatagtcggaaacgtcccagagaggatttagcacgcaattcaaccgataatttcaaa
accccagagaagcgggtgtcagtggtcccacgccggggtaagagctccacgcagtcggat
gtagatttcagaaactgggacattgatacaacttgtagttatcttcgtcgtgaaggactt
gaagaatgggagggcaaatttaaagagcatcagatcactggggtgggtctgcggtacctc
acagaggcccaactggagaagattggcattggacctttgggaaaacgccttcagatactc
cacagcctgcagaaactatggcagatcacaagcgtgcctatgaaggtcttcaacgacccc
atccatggccacattgaactgcacccactcctggtgtgcatcatcgacacacctcagttc
cagaggctccgctacatcaaacagctgggtgggacctacatggtgttccctggggcgtcc
cacaaccgctttgaacactctgtcggggttggctatctggctggccggctggtccaagcc
ctaaacgaacgacaaccggagctgctcataaccaaacaggacatcctatgtgtgcagatt
gcaggcctgtgccatgacttgggacatgggcctttctcacacatgtatgatggaatgttc
atccccaaagttcggcctgattgcaagtggaagcacgagatggcctctgtaaagatgttt
gaccacttggtgaaggagaacggtctggagccagtgatgcgggagcacggcctgaccctc
cccgatgacctggtgttcattaaggagcagatcgctggacccctggagaaccacgccccg
gctcgcaaaggccaggcccctgtaagttgccatggcaaccctatggcgtggccctacaaa
ggcagacctgaggagaagtccttcttgtacgaaatcgtggccaacaaaaggaacggcatc
gacgtggacaagtgggactactttgcgagggactgttaccaccttggtatccagaacaac
tttgactatcggcgcttcctgaagtttgcccgcgtgtgcgacgtcaaggggacgaagcac
atttgcacgagagaaaaggaagtggggaacctgtatgacatgttccacacacggaactgc
ctccatcgcagagcctaccagcacaaggttggcaacatcgttgagaccatgattacagag
gctctggtaaaggcagatccctacatccagatccagggctcaggagggaagatgttcact
ctctccacagccatagatgacatggatgcctacactaaactcacagacaacgtgtttgag
cagatcctctattcgtctactgaggagttggcagaagcccgagagatcctccagaacatc
atctgccggcggctgtacaagtgtgtgggtcagacacaccccaccaatcacatggacgtg
tcccagggtaagctgctggagtgggctaaagacgtggccaggtccaaacccagtggcaca
gacgtggagttccaaggcgaggatttcgttgtcaacgtcatccacatggactacggcatg
aagggcaagaacccgatcaacaacgtccggttctactgcaagaacgaccccaccaaagcc
atcaaaatccgcaagaatcaggtgtcccaactgctgccggagaagtttgcggagcagctg
atccgtgtgcactgcaagcgcacagacgagcgcagcctggaggcggccaagaagtacttt
gtgcagtggtgcatggacatgaacttcaccaagccgcaggatggagacgtgactgcacca
gaactgacccctttgaaagcaagctgggccagcaccgataatgacgatgatgatgatgac
gatgatgacgatgatgacgaagatgagggcataagttatccggcaagcaaacacagcaca
ccccaaaatggcgacttgaaagtgaaaacccggcttgcattatag |
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