Sardina pilchardus (sardine): 134087448
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Entry
134087448 CDS
T10667
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spil03041
]
134087448
Spliceosome [BR:
spil03041
]
Common components
Common spliceosomal components
General mRNP proteins
134087448
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
PRP38_assoc
RRM_7
Motif
Other DBs
NCBI-GeneID:
134087448
NCBI-ProteinID:
XP_062396930
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All DBs
Position
7:complement(16924304..16941134)
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AA seq
533 aa
AA seq
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MADDFDIEAMLEAPYKKDDHKSSSANGHEERSKKKHRSRSRSRSASPERRRSKSPKERKK
KRSRSRDRRRSRSRDKRRSRSRERAGRYRGRKSPFFGAKFNGGPGGKIVPPHATKQSRRR
SRSKSPFKKDKSPIRQPIDNLTPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRM
ISDRNSRRSKGIAYVEFLEATSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAANNLQK
GSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFISFADAECA
KKALDQLNGFELAGRPMKVGHVTERTDASTASSFLDNDELERTGIDLGTTGRLQLMARLA
EGTGLQIPPAAQQALQMSGSIPFGNLAAVTDLQAMLIQPPEAAGAPTMNLPSMNQAMNLP
TQPLATHCLQLSNMFSPQSENEPGWDKEIQDDVIEECNKHGGIVHIYVDKNSPQGNVYVK
CPTIPTAMAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSVTATQLLMPSRR
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgactttgatattgaagccatgttggaagctccttacaagaaggatgaccac
aaatcctctagtgcaaatggccacgaggagcgcagcaagaagaagcacaggagccgcagc
aggagccggagcgccagtccggagcgtcgccggagcaagagcccaaaagagcgcaagaag
aagaggagccgcagccgagaccgccggcgctcgcgcagcagggacaagcggcgttcacgc
agcagagagcgcgcgggccgctaccgcggacgcaagagccccttctttggggcgaaattt
aacggtggtcctggagggaagatcgtcccaccacatgccaccaaacaaagccgacgacgc
tcgcgaagcaaaagtcccttcaagaaagacaaaagtcccatcaggcaaccaatagacaac
ctgacgcctgaggagagagatgcacgcactgttttctgcatgcagttggcagcacgcata
cgtcccagagacttggaagacttcttttcggctgttggcaaagtgagagacgtgaggatg
atctcagacagaaactcccgcaggtcaaagggcattgcctatgtcgaatttttggaggcc
acctctgtgccgctggctataggactgacgggccagaggctacttggagtgccaatcatc
gtgcaggcctctcaggcagagaaaaacagggcagctgctgcagccaataacctccagaag
ggcagtgctgggcccatgcgcctgtatgtgggatcactccacttcaacatcacagaagac
atgctgagagggatcttcgagccttttggcaggattgagagtattcaactcatgatggac
agtgagactggacgctccaaaggatacggattcatctcttttgcagatgccgagtgcgcc
aagaaggctctagatcaactgaacggctttgagctggctggccggccaatgaaggttggt
cacgtgaccgagaggacggacgcgtccacggccagctcgttcctggacaacgatgagctg
gaacgcactggcatcgatctgggaaccacaggccgcttgcagctcatggcccgccttgca
gaaggcacaggcctccagatccctccagctgctcagcaagctcttcagatgagcggatcc
atcccttttggcaaccttgcagctgtaacagatttacaagccatgttgattcaaccccca
gaagctgctggagccccaacgatgaacttgcccagtatgaaccaggccatgaacctgccc
acccagcctctggctacgcactgccttcagctctccaacatgttcagcccacaatctgaa
aatgaacctggctgggataaagagatccaggatgatgtcattgaagagtgcaacaaacat
ggaggaatagtccacatatatgtggacaagaactctcctcagggcaacgtgtatgtcaaa
tgtccaactattcctaccgcaatggcagcagtcaacgccctccatggacgctggtttgca
ggtaaaatgatcacggctgcctatgtgcccctgcccacgtaccacaacttgttcccggac
tctgtgacggccacacagctcctgatgccctcacgccggtga
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