Sardina pilchardus (sardine): 134087451
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Entry
134087451 CDS
T10667
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3-B-like isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spil04121
]
134087451
Enzymes [BR:
spil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134087451
Ubiquitin system [BR:
spil04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
134087451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-TRAF
zf-RING_5
Sina_ZnF
Prok-RING_4
PDZ_Tricorn
zf-rbx1
TRAF3_RING
U-box
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
134087451
NCBI-ProteinID:
XP_062396937
LinkDB
All DBs
Position
7:complement(16953508..16993108)
Genome browser
AA seq
1143 aa
AA seq
DB search
MGFDLDRFSAIVDPDFTCNLCDKVLEDPLTTPCGHVFCASCVIPWVVQQNSCPVKCQRVS
TKELNHVLPLKNLILKLDIKCDNSARGCKRVVALQHLAEHTEMCDFSPAKCRNKGCNEVL
NLKDMDSHMRETCEYRPVEICENGCGLMLLHKDQKTDDHCCLKALKAHNGVLQVKIASLE
KELKRQSLRAISREKSLLAQLSAVHSELQMTALKYQRKFAEYNARLDSLSKSRTTTFKDG
ETRSLKVILHRSSGSLGFNIMGGRSCGDPEEEHLTEGIFVSKVVENGPADKEGGLQVHDR
IMEVNGRDLSKASHDQAVEAFRLAREPVEVQVLRRTSGTHTPTAAAAAMVSMSGRAACSH
RGVDSSTQTDITLEHISTLTQMPASSLGPLAMPMPMLGEFLLPKDCMPNCDCFYSSEYLE
GIQQELDREELEYEEVALQRMSSQDKLGLTLCYRTDEDETGVYVSEIDPNSIAAKDGRIR
EGDRIIQINGVEIQTHEDAVALLASEKSRNVCLLLARPECQLDGGWLEDDRNDFLDGLHM
DMLEEQHHQAMQYTASMLQQNMHPGYAGMHDGVAILSHHHEKDSGVGRTDDSTRNDESSE
QENAHDDAAVLLGDPRAVRAYSRDTLGSSGDGDAHLSNDSFFSADADADSLGLLEDECEH
FRELLELKYLVRGGGHGYGSGGVVPWQGAHPGAGMGGVVMPVDPELEFLNAELRHIELEC
QSIVHAHHMQRLHGQVCGAGGGGDVGVRGGGGGGGGGGDAAEPWLHRNGLHRTDARHADL
RGAMMMEPLDDAEVDKDSSSAYNTGESCRSSSTPGPSTLDLSSSTSSTQRHASDEPAQHK
PDATRASSHPLSPIRESRASPSRSRLSGKPAKVAPPTPPTTAASPAGSRQDEAASRSPAK
SKSPSRSPYKHAHIPAHAQHYQSYMHLVQQRSAVEYAQSQTSLASACCGERDDGAPPRPS
ESRGGGGSAASGDGGPKDEWKVKVRSDGTRYITKRPARGRLLRERALRICEERCGLTTDD
DAASELKMGRYWSKEERKQHASRARQQRQRREMVKQSRADATGPRDSSSSAAATGGVRGS
SGGEGTDDKREPDIIELSHKKMMRKRNRRIFDNWMTIQELLAHGTRSPDGTRVYNSLLSV
TTV
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgggatttgatttggatcgcttcagcgctatagtggaccctgactttacatgcaacctg
tgtgataaagttttagaagacccgctgacaactccgtgtgggcacgtcttctgtgccagc
tgcgtaattccttgggtcgtgcagcaaaacagttgtcccgtcaaatgtcagcgtgtctct
actaaagaactgaaccacgtattgcctctaaaaaatcttatccttaaattggacataaaa
tgtgacaattctgcaagaggctgcaagcgagtggtggcgctccaacatctggccgagcat
accgagatgtgcgacttttctccggcgaaatgcagaaacaagggctgtaatgaagtgctg
aatctgaaggatatggattcacatatgcgtgaaacgtgtgagtacagaccggtggaaatt
tgcgagaatggctgtggattgatgctgctgcacaaagaccagaaaacggacgatcattgt
tgtttgaaagcgctcaaagcgcacaacggcgtactccaagtcaaaatagccagtctggag
aaggaactgaagagacaatcgctgagagctatcagcagagagaaatctttacttgctcaa
ctctctgcggttcatagcgagcttcagatgactgccttgaaatatcagaggaaatttgcc
gagtacaacgcacggcttgactcactctccaagagcagaaccactaccttcaaggatggg
gaaaccaggagtctgaaagtgatcctgcatcgatcatctggatctttgggcttcaatatc
atgggtggcagatcctgtggggatcctgaagaggagcatttgactgaggggatttttgtg
tcaaaagtggtggagaatggcccagcagacaaagagggcggtctgcaggttcatgacagg
attatggaggtgaatggcagggacctgtccaaggcatctcatgaccaggctgtggaggcc
ttccgtctggccagagagcccgtggaggtgcaggtgctgcgacggacgtccggcacacac
acaccgacagcggcggcggcggcaatggtgtccatgtccggcagagcggcctgcagccac
aggggagtggacagcagcacgcagacggacatcacgctggagcacatctccacgctcacc
cagatgcccgcctcctctctggggcctctggccatgcccatgcccatgctgggggaattc
ctgctacccaaagattgcatgccaaactgtgactgtttttactccagcgaatacctagaa
ggcattcagcaagagcttgacagagaggagctagaatatgaggaggtggctctacagaga
atgagcagccaggacaagctgggcctgacgttgtgctaccgcactgacgaggatgagact
ggggtgtacgtcagcgagattgatccaaacagtattgcagcaaaagatgggcgcattcga
gaaggtgacagaatcattcagatcaatggtgtggagatccagacgcatgaggatgcagtg
gccctgctggccagtgagaagagcagaaatgtgtgtctcctcttggctcggcccgagtgc
cagctggacggaggctggttggaggacgacaggaacgacttcctggacgggctgcacatg
gacatgctggaggagcagcatcaccaggccatgcagtacacggccagcatgctgcagcag
aacatgcaccctgggtacgcggggatgcatgacggcgtggccatcctgtcccaccaccac
gagaaggacagtggcgtgggccgcacggacgacagcacccgcaacgacgagagctccgag
caggagaacgcgcacgacgacgccgccgtgctgctgggcgaccctcgcgccgtccgcgcc
tacagccgggacacgctgggcagcagcggcgacggagacgcgcacctgagcaacgactcc
ttcttctcggccgacgccgacgccgactccctgggcctcctggaggacgagtgcgagcac
ttccgcgagctgctggagctcaagtacctggtgcgcggcggcggtcacgggtatggaagc
ggcggtgtcgtcccgtggcagggcgcccaccccggcgcgggtatgggcggcgtggtgatg
cccgtggacccggagctggagttcctgaacgctgagctgcggcacatcgagctggagtgc
cagagcatcgtgcacgctcaccacatgcagcggctgcacgggcaggtgtgcggcgcagga
ggaggaggcgatgtaggcgtacgaggaggaggaggaggaggaggaggaggaggtgatgct
gccgagccctggctccatcgcaacggactccaccggacggacgcgcggcacgccgacctc
cggggggcgatgatgatggagcctctggacgacgcggaggtggacaaggacagctccagc
gcctacaacacgggcgagagctgccgcagcagcagcacgccgggccccagcacgctggac
ctgtcgtcctccaccagctccacccagagacacgccagcgacgagccggcccagcacaag
cccgacgccaccagggcctccagccacccgctctcgcccatccgcgagtcccgcgccagc
ccctcccggagccgtctgtccggcaagccggcgaaggtcgcaccgccgacgccgccgacg
actgctgcatcgccggcggggagcagacaggacgaggcggcgtcgaggagcccggcgaag
tcgaagtcgccgtctcgctcgccctacaagcacgcgcacatcccggcgcacgcgcagcac
taccagagctacatgcacctggtgcagcagcgctcggccgtggagtacgcccagagccag
accagcctggccagcgcctgctgcggggagcgggacgacggcgcccccccccggccctcc
gagtcccgcgggggcgggggcagcgcagccagcggcgacggcgggcccaaggacgagtgg
aaggtgaaggtgcggagcgacggcacgcgctacatcaccaagcgtccggcgcgcgggcgg
ctgctgcgcgagcgcgccctgcgcatctgcgaggagcgctgcggcctcaccaccgacgac
gacgccgccagcgagctcaagatgggccgctactggagcaaggaggagcgcaagcagcac
gccagccgcgcccgccagcagcgccagcgccgcgagatggtcaagcagagccgcgccgac
gccaccggcccgcgggactcctcctcctccgccgccgctaccgggggggtcagggggagc
agcggaggagagggaacggacgacaagcgcgagcccgacatcatcgagctcagccacaag
aagatgatgcgcaagaggaacaggcggatcttcgacaactggatgaccatccaggagctc
ttggcgcacggtacgaggtcgccggacggcacgcgtgtctacaactccctcctctccgtc
accacggtgtag
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integrated database retrieval system
