Sardina pilchardus (sardine): 134087500
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Entry
134087500 CDS
T10667
Symbol
rprd1b
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B
KO
K15559
regulator of Ty1 transposition protein 103
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spil03021
]
134087500 (rprd1b)
Transcription machinery [BR:
spil03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
134087500 (rprd1b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CREPT
CID
CTK3
ALIX_LYPXL_bnd
Motif
Other DBs
NCBI-GeneID:
134087500
NCBI-ProteinID:
XP_062397013
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All DBs
Position
7:18224078..18234147
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AA seq
330 aa
AA seq
DB search
MSSFSESALEKKLSELSNSQQSVQTLSLWIIHHRKHSSLIVRVWHREMKKAKSNRKLTFL
YLANDVIQNSKKKGPEFTRDFEGVLVDACSHVAREADDGCKRPMERLLTIWQERSLYRAD
FIQQLKLAIEDSNSPKQKPAEDKKATKRAFQKIQEEEEEEEDDYRAHYSPKDADGSGPQL
TEELVKALQDLENAASGDAAVRQKIASLPQEVQDVSLLEKITDKEAADRLSKTVDEACLL
LAEYNGRLAAELEDRRQLARMLTEYIHSQKEALTEREKKLEEYKQKLARVTQVRKELKSH
IQSLPDLSLLPNVTGGLAPLPSAGDLFSTD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcattttccgaatctgccttggagaagaagttatcggagctcagtaactcccaa
cagagtgtccagaccctgtcactgtggataattcaccatcgcaagcattcttctctcatc
gtacgagtatggcacagagaaatgaagaaagccaaaagcaacagaaagctgacatttctt
taccttgcaaatgatgtgatccagaacagtaagaagaaaggtcctgagtttactcgagat
tttgagggtgttcttgtagatgcctgctctcatgttgcaagggaggcagatgacggctgt
aaaagacccatggagaggcttctaactatctggcaggaacgcagcttgtaccgtgctgac
ttcatccagcagttaaagctggccattgaggactcaaacagcccaaagcaaaaaccagca
gaggacaaaaaggccactaaaagagccttccaaaagatccaggaggaggaggaagaggag
gaggatgactacagagcacattattctccaaaggatgcagatggcagtggaccacaactg
acagaggagttagtgaaagccctccaggatttggagaatgctgcttctggggatgctgct
gtgaggcaaaagattgcctctctaccacaggaggtccaagatgtgtcactactagagaag
atcactgataaggaggcagcagataggttatccaagacagtagatgaggcatgtctacta
ctggcagagtacaatggacggttagcggcagaactggaggacagacggcagctagctcgc
atgctcacggagtacattcacagccagaaggaggccctcactgaacgtgaaaagaaacta
gaggagtacaagcagaaactggcccgagtaactcaggttcggaaggagctgaagtctcac
atccagagcctgcctgatctttctctgctgccgaatgtcaccggaggtctggctcctctg
ccttcagcaggagacctgttctctacagactga
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