Sardina pilchardus (sardine): 134087653
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Entry
134087653 CDS
T10667
Symbol
scn8aa
Name
(RefSeq) sodium channel, voltage gated, type VIII, alpha subunit a
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
134087653 (scn8aa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
spil04040
]
134087653 (scn8aa)
Ion channels [BR:
spil04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
134087653 (scn8aa)
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Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
Zip
IQ
GPHH
Neur_chan_memb
Dynamin-like_hel_bact
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
134087653
NCBI-ProteinID:
XP_062397261
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Position
7:complement(21910849..21967654)
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AA seq
1940 aa
AA seq
DB search
MAAPMFAPPGPDRFQFFTRESLANIEKRIAEEKAKPPPKPDSSYRDDDDDNKPKPNSDLE
AGKSVPFIYGDIPSSMVATPIEELDNFYATKKTFIVVNKGKTIYRFSATSSLYMISPFNI
FRQIAIKILIHSLFSMIIMCTILTNCVFMTFSNPPEWSKQVEYTFTGIYTFESLVKIIAR
GFCIDDFTFLRDPWNWLDFMVISMAYITEFVNLGNVSALRTFRVLRALKTVAVIPGLKTI
VGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVIWPLNHTTTYLANGSEGF
DWNAYIMNDTNFYFVPGQLDALICGNSSDSGRCPEGYMCMKAGRNPNYGYTSFDSFGWAF
LALFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQA
TMEEAAKKEEEFVAMLEQLKKQQEDAQVWASQSSEHDEGEGNMSCSSSEMSKLSSKSAKE
RRNRKKKWRQKELGEEKGDCEKFVKSESDDGIRKSRFRFPDNRLGRRTSIMNQSLLSIPG
SPFLSRHNSKSSIFSFKRGKDAGSENEFADDEHSTVEECEERRNSLFSPYRRSSYSGYNY
GKRNSTVDCNGVVSLIGLGPGGRLLPEPTTEVEIKKKLSGSLMVSVDQLNTSFGGRKERA
NSVLSVVTNTLVEELEESQRKCPPCWYKFSNTFLIWECCPIWIEIKRITLLIVMDPFVDL
AITICIVLNTLFMAMEHYPMTPQFEHVLSVGNLVFTGIFTAEMFAKLVAMDPYYYFQEGW
NIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGN
LTLVLAIIVFIFAVVGMQLFGKNYKDCVCKIAQDCELPRWHMNDFFHSFLIVFRVLCGEW
IETMWDCMEVAGQSMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNL
QLAVIRMKLGIAWAKVKARHIVAVVLKRQVADEDDGYDKKISGMVNHTGVDILRDPDYQN
GTTSGIGSSVGKYNFDDDHMSFINNPNLTVCVPIAVGESDFENLNTEDFSSESEAEGSKD
VSLDDTSSSEGSTIDIKPDVEEAVVAEVVEEYVEPDACWTEGCIARYHCCDVPITEGWGK
YWWYLRKTCYLIVEHNWFETLIIFMILLSSGALAFEDVYIEQRKTIRVILEYADKVFTYI
FILEMLLKWVAYGFVKYFTNAWCWLDFFIVDVSIVSLIANALGYSDLGPIKSLRTLRALR
PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYFCFNQTSE
QLFELDVVNNKTECFALINANYSEVRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAA
VDSRRVEDQPLYEDNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMT
EEQKKYYNAMKKLGSKKPQKPIPRPQNKIQGMVFDFVTQQVFDISIMILICLNMVTMMVE
TDDQSDETENILYWVNFIFIVLFTSEFVLKLTALRHYYFTNGWNIFDCVVVILSIVGMFL
ADLIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVM
FIFSIFGMSNFAYVKREVGIDDMYNFETFGNSMICLFMITTSAGWDGLLAPILNYPPDCD
PLKENPGTTVKGNCGNPSVGIFFFVMYIIVSFLIVVNMYIAIILENFSVATEESADPLCE
DDFESFYEIWEKFDPTASQFITFAKLGDFADTLEHPLRVPKPNTIELIAMDLPMVSGDRI
HCLDILFAFTKRVLGDSGDLDMMRQQMEERFIAANPSKISFEPITTTLRRKQELMSASII
QRAYRAHLLRRGFVCRRILGTNKLENGGTNQEKKEGTPSTASLPSYDSVTKPEKERLDES
ESIGKKEKGKNQKDVRESKC
NT seq
5823 nt
NT seq
+upstream
nt +downstream
nt
atggctgcacccatgtttgcaccgccaggacctgatcgcttccaattttttacccgggaa
tccctggctaacattgagaagcgcattgctgaggaaaaagccaagccgccacccaagcct
gacagcagctaccgcgacgatgacgacgacaacaaacccaagcctaacagtgacctggag
gccggcaagtctgtgcccttcatctatggagacatcccttcttcaatggtggcgacacca
attgaagaattggacaatttctacgcgaccaagaaaacgtttatagtggtaaataaaggg
aaaacaatctaccgctttagtgccacatcttccctgtacatgatcagcccttttaatatt
tttaggcaaatagctattaaaattttgatacattcattgttcagcatgatcattatgtgt
actattttgaccaactgtgtattcatgacttttagtaaccctccagaatggtcgaaacaa
gtagagtacacattcacgggaatttatacgttcgaatctcttgtaaaaatcattgcccga
gggttctgtatagacgacttcacattcctccgagacccatggaactggctggatttcatg
gtcatttctatggcgtatataacagagtttgtaaacctaggcaatgtctcagctctgcgc
acgttcagagttctgagggcattgaaaactgttgctgttattccaggtctgaagaccatc
gtgggtgctctgatccagtcggtgaagaagctgtcggacgtgatgatcctgacggtgttc
tgcctgagcgtcttcgccctcatcggcctgcagctcttcatgggcaacctgcggcagaag
tgcgtcatctggcccctcaaccacaccaccacctacctggccaacggcagcgagggcttc
gactggaacgcgtacatcatgaacgacacaaatttctacttcgtgccagggcaactagac
gcccttatctgcggcaacagctcagactctggccgctgtcctgagggctacatgtgcatg
aaagctgggcgcaatccaaactacggctacaccagcttcgacagcttcggctgggccttc
ctggccctcttccgcctcatgacgcaggacttctgggagaacttgtatcagttgacactg
agggccgcagggaagacctacatgatcttctttgtgctggtgatcttcgtgggctccttc
tacctggtcaacctgatcctggctgtggtggccatggcctacgaggagcagaaccaagcc
accatggaggaggcggccaagaaggaggaggagttcgtcgccatgctggagcagctgaag
aaacaacaggaggacgcacaggtatgggcttcacagagcagcgagcacgacgagggcgag
ggcaacatgtcgtgcagctcctccgagatgtccaagctgagctccaagagcgccaaggag
cggcgcaaccgcaagaagaagtggcgtcagaaggagctcggcgaggagaagggcgactgc
gagaagtttgtcaagtccgagtcggacgacggcatcaggaagagccgcttccgcttcccc
gacaaccggctgggccgccggacctccatcatgaaccagtctctgctcagcatccccggc
tccccgttcctgtcgcgccacaacagcaagagcagcatcttcagcttcaagcgcggcaag
gacgccggctcggagaacgagttcgccgacgacgagcacagcacggtggaggagtgcgag
gagcgccgcaactcgctcttcagcccgtaccgccgcagcagctacagcggctacaactac
ggcaagcgcaacagcaccgtggactgcaacggcgtggtctccctgatcggcctcgggccc
ggcggacgccttctgcctgagccaactactgaggtggagattaagaagaaactctctggc
tctctcatggtttctgtggaccaactcaacacctcatttggtgggcgcaaagaacgagca
aacagtgtcctgagtgtggtgacaaacacactagtggaggaactggaggagtcccagcgg
aaatgtcccccatgctggtacaagttctccaacaccttcctgatctgggaatgctgtccg
atttggattgagatcaagaggatcacgctactgattgtgatggacccgttcgtggacctg
gccatcactatctgcatcgtgctcaacaccctcttcatggccatggagcactaccccatg
acgccccagtttgaacatgtgctcagtgtgggcaatctggtgtttacaggaattttcact
gccgaaatgtttgccaaactggttgctatggacccatactactacttccaggagggctgg
aacatctttgacggcttcattgtgagcttgagcttaatggagctcggtctggccaacgtt
gaagggctgtctgtcttgcgatcattccgtttgctgagagtgttcaagctggccaagtcg
tggcccacactcaacatgctgatcaagattatcgggaactcggtgggtgccctgggaaac
ctgaccctcgtgctggccatcatcgtcttcatcttcgccgtggtgggcatgcagctgttc
ggcaagaactacaaggactgcgtgtgcaagatcgcccaggactgcgagctgccccgctgg
cacatgaacgacttcttccactccttcctcatcgtgttccgggtgctgtgtggcgagtgg
attgagaccatgtgggactgcatggaggtggccggccagtccatgtgcctcatcgtcttc
atgatggtcatggtcatcggcaatctggtggtgctgaacctcttccttgccttgctgctg
agctcgttcagcgccgacaacctggcagcgaccgacgacgacggcgagatgaacaacctc
cagctggccgtcatccgcatgaagctgggcatcgcctgggccaaggtcaaggcgcggcac
atcgtggcggtcgtcctcaagcgccaggtggccgacgaggacgacgggtacgacaagaag
atcagcggcatggtcaaccacacgggcgtggacatcctccgcgatccggactaccagaac
ggcaccaccagcggcatcggcagcagcgtgggcaagtacaatttcgacgatgaccacatg
tccttcatcaacaaccccaacctgaccgtgtgcgtgcccatcgctgtgggagagtccgac
ttcgagaacctcaacaccgaggacttcagcagtgagtcggaggccgagggcagcaaagat
gtaagtctggacgacaccagctcgtcagagggcagcaccatcgacattaagccagatgtg
gaggaggcggtggtggcggaggtcgtggaggagtacgtggagccggacgcctgctggaca
gaaggttgcattgcccgttaccattgctgtgatgtgcccatcactgagggctggggcaag
tactggtggtacctgaggaagacctgctatctcattgtggagcacaactggtttgagacc
ctcatcatcttcatgatcttgcttagcagtggagcactggccttcgaggatgtgtacatc
gagcagaggaagaccatccgtgtcatcctagagtacgccgacaaagtgttcacctacatc
ttcatcctggagatgctgctcaagtgggtggcttatgggtttgtcaagtatttcaccaac
gcttggtgctggctggacttcttcatcgtagatgtgtctatagtcagccttatagctaat
gccctggggtactccgatctagggcccattaaatcactcaggacactaagggccctcagg
cccctcagagccttgtcacgttttgaagggatgagggtggtagtcaacgccttggtgggt
gccattccctccatcatgaatgtgttgctggtgtgcctcatcttttggctgattttcagt
atcatgggcgtcaacctgtttgcgggcaagtactacttctgcttcaaccagacgtccgag
cagctctttgagctggacgtggtcaacaacaaaacagagtgctttgccctcatcaacgcc
aactactcggaggtgcgctggaagaacgtgaagatcaactttgacaacgtgggcgctggc
tacttggcgctgctccaagtggctacattcaagggctggatggatatcatgtatgctgct
gtggactcaagaagggtggaagatcagccactatacgaggacaacatctacatgtacatc
tactttgtcatcttcatcatcttcggttccttcttcacccttaacctcttcattggtgtc
atcatcgacaacttcaatcaacagaagaaaaagtttgggggtcaggacatcttcatgaca
gaagaacagaaaaaatactacaacgccatgaaaaagttgggctcaaagaaaccccagaag
cccattcccagaccacagaacaagattcaagggatggtctttgattttgtaactcagcaa
gtgtttgacatttccatcatgatcctgatctgcctcaacatggtcaccatgatggtggag
accgacgaccagtccgacgagacggagaacattctttactgggtcaacttcatcttcatt
gtgctcttcacctcagagtttgtcctcaagctcacagccctgcgacattactacttcacc
aatggctggaacatctttgactgtgttgtggtcattctttctatcgtgggcatgttcttg
gctgacctgattgagaagtactttgtgtctccgacgttgttcagggtaatccgtctggct
cgaattggccgcatcttgcgactaattaaaggggccaagggcatccgaactttactgttt
gccctgatgatgtcactgccagccctgttcaacattggcctgttgctgttcctggtcatg
ttcatcttctccatctttggcatgtccaactttgcctacgtcaagcgagaggtgggaata
gatgacatgtacaactttgagacctttggcaactccatgatttgcctattcatgatcaca
acctcggctggttgggacggtctcctggcgcccatcctgaactatccgcccgactgtgac
cccctcaaggagaacccgggcaccacggtgaagggcaactgcgggaacccttcggtgggc
atcttcttcttcgtgatgtacatcatcgtgtccttcctcatcgtggtcaacatgtacatc
gccatcatcctggagaacttcagcgtggccacggaggaaagcgccgatccgctttgcgag
gacgacttcgagtccttctacgagatctgggagaagttcgaccccaccgcctcgcagttt
atcaccttcgccaagctgggcgactttgccgacacgctggagcacccgctgcgcgtgccc
aagcccaacaccatcgagctgatcgccatggacctgccgatggtgagcggcgaccgcatc
cactgcctggacatcctcttcgccttcaccaagcgcgtgctgggcgacagcggcgacctg
gacatgatgaggcagcagatggaggagcgcttcatcgccgccaacccgtccaagatctcg
ttcgagcccatcaccacgacgctgcgccgcaagcaggagctcatgtccgcgtccatcatc
cagcgcgcctaccgcgcccacctcctgcgccgcggcttcgtctgccggcgcatcctcggg
accaacaagctggagaacggcgggaccaatcaggagaaaaaagagggcacgccctccact
gcctccctgccctcgtacgacagcgtgaccaaaccggagaaggaaaggctggacgagagc
gagagcatcggcaagaaggagaagggcaaaaaccaaaaagacgtcagggaatctaagtgt
taa
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