Sardina pilchardus (sardine): 134087700
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Entry
134087700 CDS
T10667
Symbol
hdac6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
spil01009
]
134087700 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spil03019
]
134087700 (hdac6)
04131 Membrane trafficking [BR:
spil04131
]
134087700 (hdac6)
03036 Chromosome and associated proteins [BR:
spil03036
]
134087700 (hdac6)
Enzymes [BR:
spil01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
134087700 (hdac6)
Protein phosphatases and associated proteins [BR:
spil01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
134087700 (hdac6)
Messenger RNA biogenesis [BR:
spil03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
134087700 (hdac6)
Membrane trafficking [BR:
spil04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
134087700 (hdac6)
Chromosome and associated proteins [BR:
spil03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
134087700 (hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
134087700
NCBI-ProteinID:
XP_062397348
LinkDB
All DBs
Position
7:complement(23586711..23605190)
Genome browser
AA seq
1116 aa
AA seq
DB search
MDTGTDPSGPIVSKGSARSPQTTDITTKRESNKGKGKKSTLQEARRKGRMDRSKGEEELS
NQLKNMDLHSQTKAAGTGLVSSDIFTQYHCLWDTSHPECPERVTTVMGMAEKQGLLARCV
RVEPRVATEEELLLVHTKEYIELMMRTEKMTEEELKSLADTYDSIYIHPNSLQCATLAVG
GVLQLVDKVMTSELQNGFSIARPPGHHAQADQMNGYCMFNNLAVAARYAQKHHGVKRVLI
VDWDVHHGQGIQYIFQEDPSVLYFSVHRYEQGAFWPHLKDSDSSAIGSGPGEGYNINLPW
NQTGMKDGDYLTAFHQLLLPVAYEFQPDLVLVAAGFDSVAGDPKGEMSASPQCFAVLTHL
LKGLAQGRLVLALEGGYNLESTAKGACASLKSLLGDSCPRLSTPVVPCTSALKSISETIT
ALYPYWTCLQTFEGGPLPQQDEGNEEQPESQLTGLVYDQRMMEHHNMWDGHHPEQPMRIA
RIFSRHENLGLVSRCHSIPARLASEEELALCHSDEHIQKIKGTEGMKPRDLHRLGGEYNS
IYINNESYKCARLAAGACFNAAQAVLTGQVRNAAAIVRPPGHHAEADKACGFCFFNTAAL
TARYAQSLSPSHRPLRVLILDWDVHHGNGTQHIFEKDDSVLYISLHRYEDGTFFPNSEDA
DYDKVGEGKGRGFNVNIPWNGGKMGDSEYLAAFHHIVMPIAREFCPDLVLVSAGFDAARG
DPLGGYQVTPEGYAHFTHQLMTLAAGRVIIILEGGYNLTSISESMAMCTSMLLGDPSPRL
PSLPPPHPNAAISINNVLRAHAPYWSSLRMQIPQSLRLSLPSPKTRGKRTPVGKDKRTSR
QSTPAKSPGQVFSPEAASPVAPSPGTDHEQSGLEDLTKGLLSLDLNTTTSANSSPSSVPV
GGARRKVKPSPQKGSDMKKGASPQNVTSDNMEEEDEESKDSPQGDAQSTDDMQTAAETGT
AATATSGDQDSVELEGACGTSNNIFIICGGEDMDSGAVQPLTWCPHLEALKPVPPTGINI
QQPCDECGSEEENWLCLLCYKVLCGRFVNEHMVMHGVVSGHPLVLSFADLSVWCYPCEAY
IDNKALYEAKNTVHLAKFGQDMPVPAGEKVGDGARP
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atggatactggcaccgacccctccggacccatagtgtccaaaggttctgccagatcgcca
cagacgacagatattacaaccaaaagggaaagcaataagggtaaaggcaaaaagtccacc
cttcaggaagcgagaagaaaaggaagaatggacagaagcaaaggagaagaagagctaagc
aatcagctaaaaaacatggatttgcacagccagactaaagctgcaggaacaggtctcgtt
tcctcagacattttcacccagtaccactgcctttgggatacaagccacccagaatgcccg
gagagagtcactactgtgatgggcatggctgaaaagcagggcctgcttgctcgctgtgtg
agggtcgagccaagagttgccacagaggaggagctgttgcttgttcacacaaaggaatat
attgagctcatgatgcgaacagagaagatgacggaagaggagctgaagtctctcgctgac
acctacgactccatctacatccatccaaattctttgcaatgtgctaccttggcagtgggc
ggcgtcctgcagcttgtagataaggtgatgacgtcagagctccaaaatggcttctcaatt
gccaggccaccaggtcaccatgcccaggctgaccaaatgaacggctactgcatgttcaat
aacctggcagtagcagcacgctatgctcagaagcatcatggggtgaaacgagtcttaatt
gtggactgggatgtgcatcatgggcaaggaatccaatacatttttcaagaggatccaagt
gtgctgtacttctccgtgcaccggtatgagcagggggcattctggcctcaccttaaggac
tcggacagcagtgcaattggcagcggtccaggagagggctacaatatcaacctgccctgg
aatcagacgggaatgaaagatggagactacctgacggcgttccaccagctgctcctgcct
gtggcctatgagttccagccagatttggtgttggtggcagcaggttttgattctgtggca
ggtgaccccaagggagagatgtctgccagtcctcagtgttttgctgttcttactcacttg
ctaaaaggtttagctcagggtagactggtgcttgcccttgagggaggatataacttggaa
tcaacggcgaagggtgcctgtgccagcctgaagtcgttactgggggattcctgtccccgt
ctcagcacacctgtggttccgtgtacaagtgccctgaagtccatctccgagaccatcacc
gccctttatccatactggacctgccttcaaacatttgagggaggtcccctaccacagcag
gatgaaggaaacgaggagcagccagaaagccagctcactggtctggtgtatgaccagagg
atgatggagcaccacaacatgtgggatggtcatcacccagaacagccaatgaggatcgct
cgcatcttctcacgccatgagaacctgggactggttagccgatgccacagcatacctgct
cgcctggcctcggaagaagagctggctctctgtcacagcgatgagcacatccagaaaatc
aagggcacggagggcatgaagccccgagacctgcaccgtctgggaggagagtacaactcc
atctacatcaacaacgagagctacaagtgtgctcgactggccgcaggggcctgcttcaac
gcagcacaggctgttctcaccggacaggtgagaaacgctgcggccatcgttcggcctcct
ggtcaccacgcggaggcggacaaggcgtgcggcttctgcttcttcaacacggcagcgctg
accgcccgctacgcccagagcctctcgcccagccacagaccgctgcgcgtgctcatcctg
gactgggacgtccaccacggcaacggcacccagcatatattcgagaaggacgacagtgtg
ttgtacatctcgctacatcgatacgaggatggcacgttcttccccaactctgaggatgct
gactatgacaaagttggggaaggcaaaggtcgcggcttcaacgtcaacattccctggaac
ggggggaagatgggagactcggagtacctggcagccttccaccacattgtcatgcccatc
gccagggagttttgcccagacctggtgctggtgtccgcaggctttgatgctgcccgggga
gatcctttaggaggctaccaggtgaccccggagggctacgcccacttcacccatcagctc
atgaccttggcagccggaagagtgatcatcatccttgagggtggctataacctgacctcc
atctctgagtccatggctatgtgcactagcatgctactgggagacccttcgccacggctg
ccgtccctgccccctccacatcccaacgcagccatcagcatcaacaacgtcctgcgtgct
cacgccccctactggagctctttgagaatgcaaattccccagtccctccggctgtcttta
ccttcacctaaaaccagagggaagcggacacctgtcggaaaagacaaaaggacctcgagg
cagtcgactcccgccaaaagcccggggcaggtgttttcaccagaagcagcctcccctgtg
gccccgtcaccgggcactgaccatgaacagtcaggcctggaggacctcaccaagggcctg
ctctcgctagacctgaacacaactacctcagccaatagcagcccgtcatctgttcctgtg
ggaggagctagacggaaggtcaagccaagtcctcaaaaaggatcagatatgaagaaggga
gcatcgccccagaacgtgacctcagacaacatggaggaagaggacgaggagagcaaagac
agcccacagggggatgcacaaagcacagatgacatgcagacagctgctgaaacaggcaca
gcggccacagcaacaagtggtgaccaagacagtgtggaactggagggagcttgcggcaca
tcaaataatatttttatcatctgtggaggcgaagacatggattcaggtgcagtgcagcct
ctgacttggtgcccccatctggaggcactgaagccggtcccccctacaggcatcaacatc
cagcagccatgtgacgagtgtggctcagaggaggagaactggctctgtctcctctgttac
aaggtgctctgtggccgcttcgtcaatgagcacatggtgatgcatggcgtggtctctggc
catcccctggtgctgagtttcgctgatctctctgtgtggtgctacccatgcgaggcctac
atcgacaacaaggccctgtatgaagccaagaacacggtgcatttggccaagtttggccag
gacatgcccgtccccgctggcgagaaggtgggagacggagccaggccgtga
DBGET
integrated database retrieval system
