KEGG   Sardina pilchardus (sardine): 134087748
Entry
134087748         CDS       T10667                                 
Symbol
bcas2
Name
(RefSeq) pre-mRNA-splicing factor SPF27
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
spil  Sardina pilchardus (sardine)
Pathway
spil03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spil00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    134087748 (bcas2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:spil03041]
    134087748 (bcas2)
   03400 DNA repair and recombination proteins [BR:spil03400]
    134087748 (bcas2)
Spliceosome [BR:spil03041]
 Complex B
  Other components
   Prp19 complex
    134087748 (bcas2)
 Complex C
   Prp19-CDC5 complex
    134087748 (bcas2)
DNA repair and recombination proteins [BR:spil03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    134087748 (bcas2)
SSDB
Motif
Pfam: BCAS2 THOC7 EzrA Flagellar_rod Tup_N RRP36 HALZ Cep57_CLD Csm1_N Dsc3_C Golgin_A5
Other DBs
NCBI-GeneID: 134087748
NCBI-ProteinID: XP_062397434
LinkDB
Position
7:complement(24922436..24925540)
AA seq 225 aa
MAGTFAVAGEVFVDALPYFDQGYDGAGIREAAAALVEEETRRYRPTKNYLSYLQTPDFSA
FETEIMRNEFERLGARQPMELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVR
IENLDLMGQYGTNGWKAYNDNLAFMIESAQKELQKLRKQIQDLNWQRKNDQLAGGAKLRE
LESNWVSLVSKNYEIERAIVQLENELGQLKQQQGDENKENIRQDY
NT seq 678 nt   +upstreamnt  +downstreamnt
atggcaggaacttttgcggtggctggagaggtctttgtagacgctttaccttattttgat
cagggatacgatggtgcaggtatcagagaggcggctgctgccttggtggaagaggagacg
agaagataccgacccaccaaaaactacttgagttatcttcaaactcctgacttttctgct
ttcgaaacggagatcatgcgcaatgagtttgaaagacttggagctcgtcagcccatggaa
ctactaagcatgaaaagatatgaacttccagccccttcatctggacagaagaatgacatt
actgcttggcaggaatgtgtcaataattccatggcccagctagagcatcaggctgttcgt
attgagaaccttgatctcatgggacagtatggaacaaatggctggaaggcttataatgac
aacctggcctttatgattgaatctgctcaaaaggagttgcagaaattaagaaaacagata
caggatctcaactggcaaaggaagaatgaccagcttgctggaggagctaaactcagagaa
ctggagtcaaattgggtgtctttggtgagcaaaaactatgagatcgagcgggccatcgtg
cagctggagaatgagttggggcagcttaaacaacagcagggagatgaaaacaaggagaac
attcggcaggattactaa

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