Sardina pilchardus (sardine): 134087938
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Entry
134087938 CDS
T10667
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spil03400
]
134087938 (apex2)
Enzymes [BR:
spil01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
134087938 (apex2)
DNA repair and recombination proteins [BR:
spil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
134087938 (apex2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
134087938
NCBI-ProteinID:
XP_062397774
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Position
7:complement(31177096..31180946)
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AA seq
581 aa
AA seq
DB search
MKIVTWNINGIRTFKNAVKKTLDSFDAEIICVQETKVTRDLLDEKTAVVEGYNSYFSFSR
GRSGYSGVATFCKDSATPFAAEEGLTGLLTNNGEAVGCYGDQKEFSTEELQLLDNEGRAV
ITQHQIRGPDGPQTLAVVNVYCPRADPEKPERKLFKLQFYQLLQARAEALLASGCHVIVL
GDINTSHRPIDHCDPDDIDNFEDNPGRKWLNGFLFGVTEEEQDVEPDHDPDSSRKEAVCG
GKFVDTFRFFHPSRPQAFTCWNTLTGARQTNYGTRIDYIFGSRALVETHFVGVDIMPEVE
GSDHCPVWGHLGCELVPSARCPPFCTRYLPEFAGKQQKLSRFLVKMADQKPNAVECKEAK
DTALPGSQETEEIRENLRPLGLGASAGRKRGADGIVESSVPKGKKSKVAKAAPAKPQGSL
LAFFKPKGPTAEHKPKTSAELTDRATAENLNSSANGHAGRNNDSPLVSGPNMNNPSGKGV
PDQSRLVEVRSPEPDEGGAALPAEGGDSKKEACLPSFWKTVLRGPPQPPPCKVHNEPCVL
RTVKKAGPNMGRQFFVCARPQGHASNPQARCNFFVWVDKGK
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgttacttggaatatcaacggtatacggacatttaagaatgcagtcaagaaa
acattggattcatttgatgctgaaattatttgtgtccaagaaacaaaagttacaagggac
ctacttgatgaaaaaacagcagttgtagaagggtataactcctacttcagcttcagtaga
ggacgcagtggttactcaggggtggcaaccttttgcaaggacagtgccactccgtttgct
gcagaagaaggattgacaggcctcttgaccaacaatggggaagcggttgggtgctatggt
gaccagaaagagttctccactgaggagctgcagttgctcgacaatgaggggagagctgtc
attacacaacatcaaattaggggtccagatggaccacagacactggcggttgtgaatgtg
tactgtccccgggctgacccagagaagcctgagcgcaaactcttcaagctgcagttctac
cagctgctgcaggcgcgggctgaagcactgctggcatctgggtgccatgtgattgttttg
ggcgatatcaatacttcccaccggcccatagaccattgtgatcctgatgacattgacaat
tttgaggacaaccctggcaggaagtggctcaacggtttcctgtttggggtcacagaggag
gaacaggacgtcgagccagaccatgatcccgactcctccaggaaggaggccgtgtgcggc
gggaagtttgtggacacattccgcttcttccacccctcccgtccgcaggccttcacctgc
tggaacacgctcacgggagcgcggcagaccaactacggcacgcgcatcgactacatcttc
ggcagccgtgccctggtggagacacacttcgtaggagtggacatcatgcccgaggtggag
ggatcggaccactgccctgtctgggggcacttgggttgcgagcttgtgcccagtgcccgc
tgtcctcctttctgcacgcgctacttgcccgagtttgccggcaagcagcagaagctctcc
cgcttcctggtcaagatggccgaccagaaaccaaacgcggttgagtgcaaagaagccaaa
gacacagctcttcctggctcccaggaaacagaggagatccgagagaacctgcgccccctc
ggtttgggggccagtgccgggaggaaacggggggctgatgggatagtagagtcctccgtg
ccaaagggaaagaagagcaaagtggcaaaggcagcaccagcaaaacctcagggaagcctt
ctggccttcttcaaacctaaagggcctactgcagagcacaaaccaaagacctccgctgag
ctcacagatcgggctactgcagaaaacctcaacagctcagccaacggacatgcagggagg
aataatgactccccactggtgtctggacctaatatgaataatccaagtggtaagggagtt
cctgaccagagccgactggtagaggtaaggagtccggagccagatgagggtggagctgca
cttccggcagagggcggggattcaaaaaaagaggcgtgtttgcctagtttctggaaaaca
gtcctacgaggtccaccgcagccacctccgtgcaaggtccacaacgagccctgcgtcctg
cgcaccgtgaagaaggcgggacccaatatgggccgtcagttctttgtgtgcgccagacca
caaggccacgcctccaatccccaagccaggtgcaacttctttgtttgggtggacaaaggg
aagtag
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