KEGG   Sardina pilchardus (sardine): 134088039
Entry
134088039         CDS       T10667                                 
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11
  KO
K13103  tuftelin-interacting protein 11
Organism
spil  Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:spil00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:spil03041]
    134088039 (tfip11)
Spliceosome [BR:spil03041]
 Complex C
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-SnRNP related factors
    134088039 (tfip11)
  Other components
   Complex C specific factors
    134088039 (tfip11)
SSDB
Motif
Pfam: GCFC TIP_N G-patch G-patch_2
Other DBs
NCBI-GeneID: 134088039
NCBI-ProteinID: XP_062397915
LinkDB
Position
7:complement(34470572..34487379)
AA seq 846 aa
MSMSHLYGRREEEEDGVEIEKFEISEWDLANEFNPERRRHRQTKEEATYGIWAEHDSDEE
RPSFGGKRSKDYSAPVSFVSAGLRKTAAEEKQERQASDDSDADEAPPAPQPSRAAAPPKN
LQTGGNFKSSQRGFAGNIRPGQDLGTWEKHTRGIGQKLLQKMGYVAGQGLGKNAQGIVNP
IEAKVRKGKGAVGAYGRERTQQSLQDFPVVDSEEEEEKEFQKELGQWRREPGAGKKKPKY
SYRTVDELKAHGKVSDRGMVTPAGELAKVKVIDMTGREQRVYYSYSQMSQKHSVPEEPTL
REAVQQREKPQGFALPELEHNLKLLIELTEQDILQSARQLQHERDTVVSLSHESGALQAR
LSEEDEALGRLEEVLELVERLEAGGERGGERRGEEHGEETPVTLQECAEVFEKLQGSFYQ
EYKTLGLSDLAVSVVHPLLKSHLSSWSPLKDCSYGLEEVGQWRAILESGLMHHGAPDASN
MDPYHRLLWEVWLPVMRTAVTQWQPRTVGPMVDCIECWAPILPLWILDHVLEQLIFPRLQ
REVESWNPLTDTVPIHAWLHPWLPLLQGRLEPLYPPIRSKLANALQRWHPSDGSARLILQ
PWKDVFTPGAWEAFMVKNIVPKLELCLSELVVNPQQQHMDPFHWVMDWEGMLSLSCLVGL
LDNNFFRKWLQVLCSWLSNSPNYEEITKWYLGWKSMFSDTLLAQPLVKDKFNEALDIMNR
AVSSGIGDYMQPGARENIAYLTHTERRRDFQYRAAQERQEAESVAQRGIGAMATPTAVPT
NFKDLVQAKAVENGIVFLPLVGRRHEGKQLYTFGRITVYIDRGVVFVQGERTWVPTSLQS
LIDMAK
NT seq 2541 nt   +upstreamnt  +downstreamnt
atgtctatgtcccacttgtatgggcgtagagaggaggaagaggatggggtggagatcgag
aagtttgagatctcggagtgggacctggccaacgagttcaaccccgagcggcggcgacac
aggcagaccaaagaggaggcgacatatggcatctgggcggagcacgactccgacgaggag
cggcccagtttcggcgggaaaagaagcaaggactactcggcgccggtgagctttgtgagt
gcggggctgcggaagactgcggcggaggagaagcaggagaggcaggcctcagatgactcg
gacgcagatgaagctcctccggctccccaaccctcgcgcgctgccgcacctcctaagaac
ttacaaactggtggcaacttcaagagctcccagagggggtttgcggggaacatcaggccc
ggccaggacttgggcacctgggagaagcacactcggggcatcggacagaagctcctgcag
aagatgggctacgtagcaggccaaggcctggggaagaacgcccagggtattgtgaacccc
atcgaggccaaggtcaggaagggcaagggggcggtgggggcctacggccgcgagcgcacc
cagcagtccctgcaggacttccccgtcgtggactctgaagaagaggaggagaaggagttc
cagaaggagctgggccagtggcgcagggagccgggcgcggggaagaagaagcccaagtac
tcctacagaaccgtggacgagctcaaggctcatgggaaggtgtcagacaggggcatggtc
accccagccggagagctggccaaggtcaaggtgatcgatatgactgggcgagagcagagg
gtgtactacagctacagccagatgagccagaagcacagcgtgccggaggagcccacgctg
agggaggcggtgcagcagcgcgagaagccgcaggggttcgccctcccggagctggagcac
aacctcaagctgctcatcgagctcaccgagcaggacatcctgcagagtgcgcgtcagctg
cagcacgagcgtgacacggtggtgtctctgtcccacgagagcggcgcgctgcaggcgcgt
ctgagcgaggaggacgaggcgctgggccggctggaggaggtgctggagctcgtggagcgc
ctggaggcgggaggggagcgtgggggggagcgcaggggggaggagcacggcgaggagacg
cccgtcacgctgcaggagtgcgccgaggtgtttgagaagctgcagggctccttctaccag
gagtacaagacgctggggctcagcgacctggccgtgtccgtggtgcaccccctcctgaag
agccacctcagcagctggagtccgctcaaggactgctcttacgggctggaggaggtgggc
cagtggagggccatactggagtcaggcctgatgcatcatggggcaccggacgcctccaac
atggacccctaccacaggttgctatgggaggtgtggctcccggtgatgaggacggcggtg
acccaatggcagcccaggaccgtggggcccatggtggactgcatcgagtgctgggccccc
atactgccactctggatcctggaccatgtcctggagcagctcatcttccccagactacag
agagaggtggagagctggaacccgctgacggacacggtgcccatccacgcctggctgcac
ccgtggctgccgctcctgcagggccgcctggagccgctctacccgcccatccgcagcaag
ctggccaacgccctccagcgctggcaccccagcgacggctccgcccgcctcatcctgcag
ccctggaaggacgtgttcacaccgggcgcctgggaggccttcatggtcaagaacatcgtg
cccaagctagagctgtgtctgtcggagctggtggtgaacccgcaacagcagcacatggat
ccgttccactgggtgatggactgggagggcatgctctcgctctcctgcctggtcggcctg
ctcgacaacaacttcttccgcaaatggctgcaggtgctgtgctcgtggctcagtaacagt
cctaactatgaggagatcaccaagtggtatctgggctggaagtccatgttctccgacacg
ctgctggcccagccgctggtcaaggacaagttcaacgaggcgctggacatcatgaacaga
gccgtgtcctccggcataggtgactacatgcagccgggcgcgcgggagaacatcgcgtac
ctcacgcacacggagcggcggcgggacttccagtaccgggcggcgcaggagcgccaggag
gcggagagcgtggcgcagcggggcatcggcgccatggcgacgcccacggccgtgcccacc
aacttcaaggacctggtgcaggccaaggcggtggagaacggcatcgtgttcctgcccctg
gtgggacggaggcacgagggcaagcagctctacacgttcggccgcatcaccgtgtacatc
gaccgcggcgtggtgttcgtgcagggcgagcggacctgggtgcccacctccctccagagc
ctcatcgacatggccaagtag

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