Sardina pilchardus (sardine): 134088039
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Entry
134088039 CDS
T10667
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spil03041
]
134088039 (tfip11)
Spliceosome [BR:
spil03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
134088039 (tfip11)
Other components
Complex C specific factors
134088039 (tfip11)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
134088039
NCBI-ProteinID:
XP_062397915
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Position
7:complement(34470572..34487379)
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AA seq
846 aa
AA seq
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MSMSHLYGRREEEEDGVEIEKFEISEWDLANEFNPERRRHRQTKEEATYGIWAEHDSDEE
RPSFGGKRSKDYSAPVSFVSAGLRKTAAEEKQERQASDDSDADEAPPAPQPSRAAAPPKN
LQTGGNFKSSQRGFAGNIRPGQDLGTWEKHTRGIGQKLLQKMGYVAGQGLGKNAQGIVNP
IEAKVRKGKGAVGAYGRERTQQSLQDFPVVDSEEEEEKEFQKELGQWRREPGAGKKKPKY
SYRTVDELKAHGKVSDRGMVTPAGELAKVKVIDMTGREQRVYYSYSQMSQKHSVPEEPTL
REAVQQREKPQGFALPELEHNLKLLIELTEQDILQSARQLQHERDTVVSLSHESGALQAR
LSEEDEALGRLEEVLELVERLEAGGERGGERRGEEHGEETPVTLQECAEVFEKLQGSFYQ
EYKTLGLSDLAVSVVHPLLKSHLSSWSPLKDCSYGLEEVGQWRAILESGLMHHGAPDASN
MDPYHRLLWEVWLPVMRTAVTQWQPRTVGPMVDCIECWAPILPLWILDHVLEQLIFPRLQ
REVESWNPLTDTVPIHAWLHPWLPLLQGRLEPLYPPIRSKLANALQRWHPSDGSARLILQ
PWKDVFTPGAWEAFMVKNIVPKLELCLSELVVNPQQQHMDPFHWVMDWEGMLSLSCLVGL
LDNNFFRKWLQVLCSWLSNSPNYEEITKWYLGWKSMFSDTLLAQPLVKDKFNEALDIMNR
AVSSGIGDYMQPGARENIAYLTHTERRRDFQYRAAQERQEAESVAQRGIGAMATPTAVPT
NFKDLVQAKAVENGIVFLPLVGRRHEGKQLYTFGRITVYIDRGVVFVQGERTWVPTSLQS
LIDMAK
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgtcccacttgtatgggcgtagagaggaggaagaggatggggtggagatcgag
aagtttgagatctcggagtgggacctggccaacgagttcaaccccgagcggcggcgacac
aggcagaccaaagaggaggcgacatatggcatctgggcggagcacgactccgacgaggag
cggcccagtttcggcgggaaaagaagcaaggactactcggcgccggtgagctttgtgagt
gcggggctgcggaagactgcggcggaggagaagcaggagaggcaggcctcagatgactcg
gacgcagatgaagctcctccggctccccaaccctcgcgcgctgccgcacctcctaagaac
ttacaaactggtggcaacttcaagagctcccagagggggtttgcggggaacatcaggccc
ggccaggacttgggcacctgggagaagcacactcggggcatcggacagaagctcctgcag
aagatgggctacgtagcaggccaaggcctggggaagaacgcccagggtattgtgaacccc
atcgaggccaaggtcaggaagggcaagggggcggtgggggcctacggccgcgagcgcacc
cagcagtccctgcaggacttccccgtcgtggactctgaagaagaggaggagaaggagttc
cagaaggagctgggccagtggcgcagggagccgggcgcggggaagaagaagcccaagtac
tcctacagaaccgtggacgagctcaaggctcatgggaaggtgtcagacaggggcatggtc
accccagccggagagctggccaaggtcaaggtgatcgatatgactgggcgagagcagagg
gtgtactacagctacagccagatgagccagaagcacagcgtgccggaggagcccacgctg
agggaggcggtgcagcagcgcgagaagccgcaggggttcgccctcccggagctggagcac
aacctcaagctgctcatcgagctcaccgagcaggacatcctgcagagtgcgcgtcagctg
cagcacgagcgtgacacggtggtgtctctgtcccacgagagcggcgcgctgcaggcgcgt
ctgagcgaggaggacgaggcgctgggccggctggaggaggtgctggagctcgtggagcgc
ctggaggcgggaggggagcgtgggggggagcgcaggggggaggagcacggcgaggagacg
cccgtcacgctgcaggagtgcgccgaggtgtttgagaagctgcagggctccttctaccag
gagtacaagacgctggggctcagcgacctggccgtgtccgtggtgcaccccctcctgaag
agccacctcagcagctggagtccgctcaaggactgctcttacgggctggaggaggtgggc
cagtggagggccatactggagtcaggcctgatgcatcatggggcaccggacgcctccaac
atggacccctaccacaggttgctatgggaggtgtggctcccggtgatgaggacggcggtg
acccaatggcagcccaggaccgtggggcccatggtggactgcatcgagtgctgggccccc
atactgccactctggatcctggaccatgtcctggagcagctcatcttccccagactacag
agagaggtggagagctggaacccgctgacggacacggtgcccatccacgcctggctgcac
ccgtggctgccgctcctgcagggccgcctggagccgctctacccgcccatccgcagcaag
ctggccaacgccctccagcgctggcaccccagcgacggctccgcccgcctcatcctgcag
ccctggaaggacgtgttcacaccgggcgcctgggaggccttcatggtcaagaacatcgtg
cccaagctagagctgtgtctgtcggagctggtggtgaacccgcaacagcagcacatggat
ccgttccactgggtgatggactgggagggcatgctctcgctctcctgcctggtcggcctg
ctcgacaacaacttcttccgcaaatggctgcaggtgctgtgctcgtggctcagtaacagt
cctaactatgaggagatcaccaagtggtatctgggctggaagtccatgttctccgacacg
ctgctggcccagccgctggtcaaggacaagttcaacgaggcgctggacatcatgaacaga
gccgtgtcctccggcataggtgactacatgcagccgggcgcgcgggagaacatcgcgtac
ctcacgcacacggagcggcggcgggacttccagtaccgggcggcgcaggagcgccaggag
gcggagagcgtggcgcagcggggcatcggcgccatggcgacgcccacggccgtgcccacc
aacttcaaggacctggtgcaggccaaggcggtggagaacggcatcgtgttcctgcccctg
gtgggacggaggcacgagggcaagcagctctacacgttcggccgcatcaccgtgtacatc
gaccgcggcgtggtgttcgtgcagggcgagcggacctgggtgcccacctccctccagagc
ctcatcgacatggccaagtag
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