Sardina pilchardus (sardine): 134088410
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Entry
134088410 CDS
T10667
Name
(RefSeq) transcription termination factor 1-like isoform X1
KO
K15225
transcription termination factor 1
Organism
spil Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spil03021
]
134088410
Transcription machinery [BR:
spil03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
134088410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_4
Motif
Other DBs
NCBI-GeneID:
134088410
NCBI-ProteinID:
XP_062398340
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All DBs
Position
8:3046323..3068934
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AA seq
713 aa
AA seq
DB search
MSAGNVLFEVTMTEAELLPQEKKKKKKNKKHRPELAPEPGSPQETATEVDSVKTYKHKKK
KSKGPEEDDFTPAEVPCGIGERKKKRKREAENLNVTRVMTEESADVAVPQEGEIKKKKKK
KKRRADETVSTGENTEADVSLTPVQVDSEASQQKPAKKSQSEKIRKNANSQPAENTLSPA
ENTLSPAENTLSPADDTLSPAEDTLSPAEDRFVALPQEEELKRREKKKKRRADETVSTGE
STEADVSPTPVQVDSEASQQKPAKKRKSEKIRKIANSQPAENTLSPAEDGLSPAEDTLSP
AENTLSPAEDTLSPAENTLSPAEDRPSPAEDTLSLTDTTPHLDDGLKEAPVLDLDDAVLQ
ELKEFLPNFQLHDHAWVVKVINYDLPRFREFKTQGIPVRTGRFTASENKKLQLNVKNFLL
ISGIDSAEKLFKPHRFPDEMSTIRSQKRQLGFIRSVCAGIPRSWFTILARARKMFDEENY
KGKFTEDENEALKKLHTLHGTNWLTISDKMGRSQEAVKKRFAMMSEAHGSWSEAEMKTLL
TSVRQLLLERAEPDADGSLIIKKSDLYKKLAWVCVAEQQQARSWLQCREKWMEYLTRRMT
TGGTIKGRKSLNGQIQLIKALNEMAVEDPADIVWDDLTHLFGNTPPDYLQMRYYQLKLTY
VPGWNTKPFCDVVDFLYGKVLPQLEAQLETCEEEDMPCEERQTYKLSEIFPDS
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccggaaacgtcctgttcgaggtgaccatgacggaagcagaactgttgcctcag
gaaaagaaaaagaagaaaaagaacaagaaacaccgaccagagttggcgccagaacctggc
agtcctcaagagacagccaccgaagtggactctgtcaagacatacaaacacaagaagaag
aaatcaaaaggacctgaggaagatgactttacaccagctgaggttccatgtggaattggt
gaaagaaaaaagaaaagaaaacgtgaagcagagaacttaaacgtgacacgagtgatgacg
gaagagtctgcagacgttgctgttccccaggagggagaaattaagaagaaaaagaagaaa
aagaaaaggagagctgatgagacggtctccactggagagaacacagaggcagatgtgtcg
ctcacgccggtgcaagtggacagtgaggcgtcccaacagaagcctgccaagaagagccag
tccgagaagatcagaaaaaacgcaaattctcagcctgcggaaaacacactctctcctgca
gaaaacacactctctcctgcggaaaacacactctctccagcggatgacacactctctcct
gcagaagacacgctctctcctgcggaagacagattcgttgctcttccccaggaggaagaa
ctgaagaggagagagaagaaaaagaaaaggagagctgatgagacggtctccactggagag
agcacagaggcagatgtgtcacccacgccggtgcaagtggacagtgaggcgtcccaacag
aagcctgccaagaagaggaagtccgagaagatcagaaaaatcgcaaattctcagcctgcg
gaaaacacactctctccagcggaagacggactctctcctgcggaagacacactctctcct
gcggaaaacacactctctcctgcggaagacacactctctcctgcggaaaacacactctct
cctgcggaagacagaccctctcctgcagaagacacactctcgctcacagacaccacgcct
cacctggatgatgggctaaaggaagcacctgtgctggacctggacgatgctgtgctccag
gagctcaaggagtttttgcccaacttccagctccacgaccacgcctgggttgtgaaggtc
atcaactatgacctaccccgcttcagagaattcaagacgcaaggtatccctgtgcgcacc
gggaggttcactgcctccgagaacaagaagctgcagctgaatgtgaaaaacttcctgctg
atcagcgggattgacagcgcggagaagcttttcaaaccacaccgcttcccggatgagatg
tctaccatcaggagtcagaagagacagctcgggtttattcgtagtgtctgtgctgggata
cctcgtagctggttcaccatcctcgcacgagccaggaagatgtttgacgaggagaattac
aagggaaagtttacagaagacgagaacgaggctttgaaaaagctgcacacactgcatggg
acaaactggttgaccatctcagacaagatgggccgcagccaagaagctgtaaagaaacgc
tttgccatgatgtctgaggctcatgggtcatggtcggaggcggagatgaagacgctgttg
accagcgtacggcagctgctgctggagagggcggagcctgatgcggacggctccttgatc
atcaagaagagcgacctgtacaagaagctggcctgggtgtgtgtggcagagcaacagcag
gctcgaagctggctgcagtgcagggagaaatggatggaatacctcacaagaagaatgacg
actggaggaacgatcaaagggaggaagagcctaaatgggcaaatccagctgatcaaagca
ctcaatgaaatggctgtggaggaccctgcagacatcgtctgggacgacctgactcatctc
ttcgggaacactcctcctgactatctccaaatgaggtactaccagctgaagctgacctat
gtcccgggctggaacaccaagcctttctgtgacgtcgtcgatttcctgtatgggaaggtg
ctgccccagctggaggctcagctggagacgtgtgaggaggaggacatgccctgtgaagaa
cgccagacctacaagctgtccgagatcttccccgactcctga
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