Sardina pilchardus (sardine): 134088462
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Entry
134088462 CDS
T10667
Symbol
vsig8b
Name
(RefSeq) V-set and immunoglobulin domain-containing protein 8b
KO
K06788
coxsackievirus and adenovirus receptor
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04514
Cell adhesion molecule (CAM) interaction
spil04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03267 Virion - Adenovirus
134088462 (vsig8b)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
134088462 (vsig8b)
04517 IgSF CAM signaling
134088462 (vsig8b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
spil04515
]
134088462 (vsig8b)
Cell adhesion molecules [BR:
spil04515
]
Immunoglobulin superfamily
CTX family
134088462 (vsig8b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
V-set
ig
Ig_3
I-set
Ig_2
Ig_C17orf99
Sp38
Tweety
DUF3426
Syndecan
Motif
Other DBs
NCBI-GeneID:
134088462
NCBI-ProteinID:
XP_062398410
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All DBs
Position
8:4844122..4856994
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AA seq
357 aa
AA seq
DB search
MEAEPKRMGGWCLALLTALLLQAGVSQSMVVTSTGPKTIKKAQGESVILGCTYSPSPSDT
GALDIEWTDVSPDMTEKDKLLLSYSGGQEFQLGDPGLMKRLQFVGPPQNGDATIVITSLQ
VSDTATYQCKVKKTPGVDSRKVTVVVLVRPSVPKCWVDGNEEKGASVSLRCKSSSGSTPL
TYTWKREDGASIPPTASINTQTGELLIRNHSESYTGRYVCEVKNEVGTEQCVYSLRAHNP
VNRAGVIAGAVIGALLLLLLLLLLIWLLICCCNKRRYEKEVANEIREDVVAPESRPTSRV
SSMRSIMGYHTHSGIMYSSVRSGAPQRAPSDLHSASPKSDSIYKPALNYDSRYGYPV
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggaagctgaacccaaacgcatgggaggatggtgtctagcgctgctgacagcactgctc
ttgcaagcaggtgtgtcccagagcatggtggtgacgtccacagggcctaagaccatcaag
aaggcccagggggagagtgtgattctgggatgcacctacagcccaagcccatcggatact
ggagcactggacatcgagtggaccgacgtcagccctgacatgaccgagaaggacaagctg
ctcctctcgtactccggtgggcaggagttccagctgggcgaccccggcctgatgaagcgg
ctgcagttcgtggggccgccccagaacggcgacgccaccatagtcatcacgtccctgcag
gtctccgacacagccacctaccagtgcaaggtcaagaagacgccgggggtcgactctcga
aaggtcacagtggtggtgctggtgcgcccctctgtacccaagtgttgggtcgatggtaat
gaggagaagggggcgtccgtgtcgctacgctgcaagtcctccagtggctccacgccgctc
acctacacttggaaaagagaggacggagcaagcatacctcccacagccagcatcaacacc
cagactggggagctactgatcaggaaccactcagagagctacacgggccgctacgtgtgt
gaggtgaagaacgaagtggggaccgagcagtgtgtgtacagcctacgggcccacaaccct
gtgaatagagccggggtgatcgctggagctgtgattggtgctctgctgcttttgctcctc
ctcctgctcctcatctggctcctgatttgctgttgcaacaagcgtcgctatgagaaggag
gtggctaatgagatcagggaggacgttgtggccccagaaagccgtccgaccagtcgtgtg
tcgagtatgcgctccatcatgggctaccacacccactctggcatcatgtacagctccgtg
aggagcggcgccccccagagggctccatcggacctgcactccgcctcccctaagtccgac
agcatctacaagcccgcgctcaactacgacagtcgctacggataccccgtctaa
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