Sardina pilchardus (sardine): 134088555
Help
Entry
134088555 CDS
T10667
Symbol
lgi3
Name
(RefSeq) leucine-rich repeat LGI family member 3
KO
K19999
leucine-rich repeat LGI family member 3
Organism
spil
Sardina pilchardus (sardine)
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spil04131
]
134088555 (lgi3)
Membrane trafficking [BR:
spil04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
134088555 (lgi3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_5
LRR_4
LRR_1
LRRCT
LRR_9
LRR_14
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-GeneID:
134088555
NCBI-ProteinID:
XP_062398545
LinkDB
All DBs
Position
8:7887351..7901003
Genome browser
AA seq
561 aa
AA seq
DB search
MLEAGPRKVPRWPQWRQLLPAASLWMLLLLPLLLLGPTGGEAKRPPKIPRCPATCSCTKD
SAFCVDTKAIPKSFPPGIISLTMVNAAFSTIPEGAFSHLHLLQFLLLNSNTFSLIADDAF
AGLSHLQYLFIENNDIQSLSKHTFRGLKSLTHLSLSNNNLQGLPRELFKYLDILTDLDLR
GNAFRCDCKIKWLVDWMEKTNTSVPAIYCASPFEFQGRRIHDLTPRDFNCISADFAVYET
FPFQSLSVESYEFGGDQYVVFAQPNTGICTVFVWDHVEMVFRKYNNITSRSAVYCKPVVI
NNTLYMVVAQLFGGSHIYKWEEGPLRFVKIQDIDTTRVRKPNFVETFQIEGDWYFAVVDS
SKAGSTSIYRWNSNGFYSHQSLHPWHRDTHVEFLEVEGKPRLILSSASQPPVVYQWNRSQ
RQFAFYSQIADTADVQMVKHFWIRKVLYLCLTRFIGDSKILRWEGQRFVEIQTLPSRGSM
AVYPFSVGLRQYLLLGSDYSFSRVYLWDDLTQRYQPFQELNLLAPRAFSLINVDNKDILL
AASFKGKTLAYQHLVVDLSAK
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgctggaggctgggccgaggaaggtgccgagatggccgcagtggaggcagctgcttccc
gccgcctccctatggatgctgctgctgctgccgctgctgctgctggggccgacgggcggc
gaggccaagcgcccgcccaagatcccccgctgccccgctacctgctcctgcaccaaggac
agcgctttctgcgtggacaccaaggccatccccaagagcttccccccggggatcatctcc
ctgacgatggtgaacgctgccttcagtacgattccagagggagcattctctcacttgcac
ctgctccagttcctattattgaactcaaacacattttctttgattgctgatgatgccttt
gctggtctatcacatttgcaatatctgttcattgaaaataatgacatccagtcgctgtca
aagcatacattcagaggactaaaatccctaacgcatttatctctttccaataataatcta
cagggtcttcctcgggaactcttcaagtatcttgatatcctcacagacttagacctgcgc
ggtaacgcgttccgctgcgactgcaagatcaaatggctggtggactggatggagaagacc
aacacgtctgtgccagccatctactgcgccagccccttcgagttccagggccgccgcatc
cacgacctcaccccgcgggacttcaactgcatcagcgcagactttgctgtgtacgagacc
ttccccttccagtccctgtctgtggagtcctatgagtttggtggagaccagtatgtggtg
tttgctcagcccaacactggaatttgcacagtatttgtgtgggatcacgtggagatggtt
ttcaggaagtacaacaacattacatctcgatcagcggtctactgcaagcccgtggttatc
aacaacactctctacatggtggtagcccagctttttggaggatcccacatatacaaatgg
gaggaaggccctctaagatttgtgaagatccaagatattgacacaacccgtgtccgtaag
cctaactttgtggagaccttccagatagagggggattggtactttgctgtggtggacagc
tccaaggcaggctcgaccagcatctatcgctggaacagcaacggcttttactcccatcag
tccttgcacccctggcaccgcgacacccatgtggagttcctggaggtggagggcaagccg
cggcttatcctctccagcgcctcgcagcccccggtggtctaccagtggaatcgcagccag
cgccagttcgccttctactcgcagatcgccgacacggccgacgtgcagatggtcaagcac
ttctggatccgcaaggtgctctacctgtgcctcacgcgcttcatcggcgactccaagatc
ctgcgctgggagggacagcgcttcgtggagatccagacgctgccgtcgcgcggctccatg
gcggtctacccgttcagcgtgggcctgaggcagtacctcctgctgggcagcgactactcc
ttctctcgggtgtacctgtgggacgacctcactcagcgctaccagcccttccaggagctc
aacttgctcgccccgcgggccttcagcctcatcaacgtggacaacaaggacatcctgctg
gccgctagcttcaagggaaagaccctggcgtaccaacacctagtggtggacctgagtgca
aagtaa
DBGET
integrated database retrieval system
