Sardina pilchardus (sardine): 134088611
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Entry
134088611 CDS
T10667
Symbol
tncb
Name
(RefSeq) tenascin
KO
K06252
tenascin
Organism
spil Sardina pilchardus (sardine)
Pathway
spil04510
Focal adhesion
spil04512
ECM-receptor interaction
spil04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
spil00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134088611 (tncb)
04518 Integrin signaling
134088611 (tncb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134088611 (tncb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
spil00536
]
134088611 (tncb)
Glycosaminoglycan binding proteins [BR:
spil00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
134088611 (tncb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
EGF_TEN
Fibrinogen_C
EGF_Teneurin
EGF_2
EGF_Tenascin
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
Fn3_PBP1
DUF7949
Fn3_Dep-1_2nd
Pur_ac_phosph_N
EGF
EGF_PEAR1L
fn3_2
hEGF
Actin
SPE9_EGF_3rd
Motif
Other DBs
NCBI-GeneID:
134088611
NCBI-ProteinID:
XP_062398642
LinkDB
All DBs
Position
8:complement(9642338..9683065)
Genome browser
AA seq
1701 aa
AA seq
DB search
MGMRSLLLGVAIMAFVLQLSHAGLLHKVIRHRRETLSPASSGQNASLPSPDQPVVFNHVY
NINVPSSALCSVDLESAGGAEKLPPRPAALTAPAPAARHPLPSDMHTEHTVDGENQIVFT
HRINIPKQACACDGHLPDLKDLLKRLELLEAEVSSLREQCSSGIGCCGAQVTGELTTRPY
CSGHGNYSVDTCGCVCEPGWKGVNCSEPECPNDCQDQGRCVDGRCECFEGYSGDDCALEL
CLEDCGDYGECIEGSCVCEEGFLGRDCSQTNCPNNCLGRGRCVDDECVCDEPWTGFDCTE
LICPNDCYDRGRCNNGTCECDEGFAGDDCGQLTCPGDCNSRGACLNGKCVCHAGYSGDDC
SKLTCPNDCHQRGHCFNGRCICDPGYEGEDCGVLSCPDNCNNRGQCVNGQCLCDVGWEGE
DCSDRSCPNNCMNLGRCVNGKCVCKQGYSGEDCSVKLCPNNCHGRGECVDGKCVCPAGYT
GKDCGELTCPSNCNSRGRCVNGQCVCNRGFTGEDCNEKMCPNNCLDRGYCVDGKCVCFEG
FTGADCSVLTCPDDCSDQGHCLNGLCICDMGFTGIDCSQISPVKDLKVVEVDPETVDVSW
ENEMLVTEYLVTYVPTAPGGLELDMRVKGDRRQATIRELEPGIEYLISVYALLNNKMSLP
VSARVATHLPQPEGLKFKSVRETSVEVEWDPLNIPFDSWNLIFRNTKEENGEILNALSPP
ETTFEQSGLGPGQEYEVKLQVVKNNTRGPPATKNFFTTIDSPSQVDVRDVTDTAALITWF
QPVSQVDSVSISYGPSEDPSDRNTVELSASDTQHHLSDLHPDTEYEVGLMAKRGEVTSVP
VYENFVTDLDAPKDLQTLELTDDSITLEWTNSRAKVLSYRVKFGPLSGGEHGETVFPAGE
QDTTQAKLTGLRPGTEYGMGVTAVKDERESLPTTTNAVTDLDAPKDLEVSEATETTLLLV
WTKPLAKIDIYRLVFVSAEGRRAEVEVPGGADTHTLVNLTPGMAYTITLVAERARRKSAP
ATITATTDEKKPQVGSVSVSDVSWDSFLVSWTLERGACESFLIEVESEGGEDTHNLTVPG
DASSQAFGGLLPATLYKVVLYGLHNGALLEPVFAETTTELEPEVEHLFVSDVTPTSFKLA
WSAPDNVFDSFVIQVSDEASGWFERFTVSGGERTKVVSDLLEGTEYQIEIYGVILERRFP
PLSGAAKTGLGMPKGIRFSDVTDTSATVHWSVPRARVDSYRVSYVPLQGGSPMTVTVDGA
ESQTVLPNLTPGVTYQVTVIAVKGLEESEPGSDTVTTALDKPRGLTAMNITDTEALLLWQ
PAIATVDGYVITYSADSVGPVMERVSGNTVEFEMTSLTPATHYTVKVYAVRDSYKSAATT
TEFTTDVDAPKDLAASNIQTESAMLTWKPPRADISGYILSFESVDGAVREVVLSPTATSY
NMAQLSASTVYDVKLQALAGPKRSRVITTAFTTIGVLYKHPKDCSQALLNGESTSGVYTI
YLRGDESQPLQVYCDMTTDGGGWIVFVRRQSGKVEFFRNWRNYTAGFGDLNDEFWLGLSN
LHKITSSGQYELRVDLRDKGETVYAQYDKFSVSEPRSRYKVHVGGYSGTAGDSMTYHHGR
PFSTYDHDNDIAVTNCALSYKGAFWYKNCHRVNVMGRYGDNSHSKGVNWFHWKGHEHSIE
FAEMKMRPANFRNFEGRRKRS
NT seq
5106 nt
NT seq
+upstream
nt +downstream
nt
atggggatgcgaagcctgctcctgggcgtcgccatcatggccttcgtgctgcagctgtcc
cacgccggcctgctgcacaaggtcatccgccaccggcgagagaccctgagcccggcctcc
tccggccagaacgcgagcctgcccagccccgaccagccggtggtcttcaaccacgtctac
aacatcaacgtgccgtccagcgcgctgtgctccgtggacctggagtcggccggcggcgcc
gagaagctcccgccccggccggccgccctcaccgccccggcaccggccgctcggcatccg
ctgccctccgacatgcacacggagcacacggtggacggcgagaaccagatcgtcttcacc
caccgcatcaacatccccaagcaggcgtgcgcctgcgacggccacctgcccgacctcaag
gacctgctgaagaggctggagctgctggaggccgaggtgtccagcctgagggagcagtgc
tccagcggcatcggctgctgtggagctcaggtgacaggagagctgaccaccaggccctac
tgcagcggtcacggcaactacagcgtggacacgtgcggctgcgtgtgcgagcccggctgg
aagggcgtcaactgctccgagcccgagtgccccaacgactgccaggaccagggccgctgc
gtggacggccgctgcgagtgcttcgagggctactcgggcgacgactgcgccctggagctg
tgcctggaggactgcggcgactacggcgagtgcatcgagggctcgtgcgtgtgcgaggag
ggcttcctgggccgcgactgctcgcagaccaactgccccaacaactgcctgggccgcggc
cgctgcgtggacgacgagtgcgtgtgcgacgagccctggacgggcttcgactgcaccgag
ctcatctgccccaacgactgctacgaccgcggccgctgcaacaacggcacgtgcgagtgc
gacgagggcttcgccggcgacgactgcggccagctcacgtgcccgggcgactgcaacagc
cgcggcgcctgcctcaacggcaagtgcgtgtgccacgccggctacagcggcgacgactgc
tccaagctcacctgccccaacgactgccaccagaggggccactgcttcaacggccgctgc
atctgcgacccgggctacgagggcgaggactgcggcgtcctgtcctgcccggacaactgc
aacaaccgcggccagtgcgtcaacggccagtgcctctgcgacgtgggctgggagggcgag
gactgctcggaccgctcgtgccccaacaactgcatgaacctcggccgctgcgtcaacggc
aagtgcgtgtgcaagcagggctactcgggcgaggactgcagcgtcaagctgtgccccaac
aactgccacgggcgcggggagtgcgtggacggcaagtgcgtgtgccccgccggctacacg
ggcaaggactgcggcgagctgacctgcccgagcaactgcaacagccgcggacgctgcgtc
aacggccagtgcgtctgcaaccggggattcaccggcgaggactgcaacgagaagatgtgc
cccaacaactgcctggaccgggggtactgcgtcgacggcaagtgcgtctgcttcgagggc
ttcacgggagccgactgctccgtgctcacctgcccggacgactgcagtgaccaaggccac
tgcctgaacggactctgcatctgtgacatgggattcaccggcattgactgctctcagatc
agcccagtgaaggacttgaaggtggtggaggtggaccccgagacggtggacgtgtcctgg
gagaacgagatgctggtgacggagtacctggtgacctacgtgcccacggcgcccggcggc
ctggagctggatatgcgcgtgaagggagacaggcgtcaggccaccatccgcgagctggag
cccggcatcgagtacctcatcagcgtctacgccctcctcaacaacaagatgagcttgccc
gtcagcgccagagtagccacacatcttccccagccagagggcctgaagtttaagtcagtg
agagagacgtctgtggaggtggagtgggaccccctgaacatccccttcgatagctggaac
ctcatcttcaggaacaccaaagaggagaatggggagatcctgaatgcgctgagcccgcct
gagaccacctttgagcagtccggtctggggccgggccaggagtacgaagtcaagctgcag
gtggtgaagaacaacacccgcggaccccccgccaccaagaacttcttcacaacgatcgac
tcccccagccaggtggatgtccgcgacgtgaccgacaccgccgccctgatcacctggttc
cagcccgtgtctcaggtggacagtgtgtccatctcctacggccccagcgaggacccgtcc
gaccgcaacaccgtggagctctccgcctcggacacgcagcaccacctgagcgacctgcac
cccgacaccgagtacgaggtcggcctcatggccaagcgaggagaggtcaccagcgtgccc
gtctacgagaatttcgtcacagatctggacgccccgaaggacctgcagacgctggagctg
acggacgacagcatcacgctggagtggaccaacagccgggccaaggtgctgagctaccgc
gtcaagttcggcccgctgtccggcggagagcacggagagaccgtcttccccgccggggag
caggacaccacccaggccaagctcacgggcctgaggccaggaaccgagtatggtatgggg
gtgaccgctgtcaaggacgaacgcgagagcttgcccacaacaactaacgcagtgactgat
ctggacgctccgaaggacctggaggtgagcgaggccacggagaccacgctgctcctggtc
tggaccaagccgctggccaagatcgacatctaccgcctggtcttcgtgtcggccgagggc
cggcgggccgaggtggaggtgcccggtggcgccgacacccacacgctggtcaacctgacg
cctggcatggcctacaccatcaccctggtggcggagagagcccggaggaagagcgccccc
gccaccatcactgccaccaccgacgagaagaagccccaagtgggcagtgtgtctgtgtcc
gacgtgtcgtgggacagcttcctggtgtcctggactctggagcggggcgcctgcgagagc
tttctgatcgaggtcgagtccgagggcggtgaggacacgcacaacctcaccgtgccgggc
gacgcgtccagccaggccttcggcggcctgcttccggccaccttgtacaaggtcgtcctc
tacggcctccataacggcgctctcctagagcctgtctttgccgagaccactacagagctg
gagcccgaggtggagcacctgtttgtgtcggacgtcacgcccacgagcttcaagctggcc
tggagcgccccggacaacgtctttgatagctttgtcatacaagtttctgacgaggcgagc
ggttggtttgagcggttcactgtgtccggcggcgagaggacaaaggtcgtctcggatctt
ctggagggcacagagtaccaaattgaaatctacggtgtcattttggaacgccgcttcccg
cccctttctggtgccgccaagacaggcctaggaatgcccaagggcatccgtttctccgac
gtcactgacacgtctgccaccgtccactggagtgtgcctcgcgcccgtgtcgacagctat
cgggtgtcctatgtgccccttcagggaggaagccccatgactgtgactgtggacggagca
gagtctcagaccgtgctgcccaacttgacccctggggtcacctaccaagtgaccgtcatt
gccgtcaaaggcctggaggagagtgagccaggctctgatacagtcacaactgcgttggat
aagccccgtggcctgacggccatgaacatcacagacacagaggctctgcttctctggcag
cctgccatcgccactgtggacggttacgtcatcacctacagtgccgactcagttggccct
gtgatggaacgtgtgtcaggcaacactgtggaattcgagatgacctccctgaccccagcc
acccactacacggtcaaagtctacgccgtgcgcgactcttacaagagtgccgccaccacc
accgagttcaccaccgacgtggatgcgcccaaggacctagcggccagcaacatccagacg
gagagtgccatgctgacgtggaagcccccccgcgctgacatcagcggctacatcctcagc
ttcgagtccgtcgatggcgccgtcagagaagtggtcctcagcccaaccgccacttcatac
aacatggcccagctcagcgcctccaccgtttatgacgtcaaactgcaggctctggccggg
cccaagaggagtcgagtcatcaccaccgccttcaccaccattggcgtcttgtacaagcac
cctaaggactgctcacaggccctgctgaacggagagagcacctctggagtttataccatc
tacctgcgcggagatgagagccagcctctgcaagtctactgcgacatgaccacagatggt
ggtggctggattgtcttcgtgagacgccagagtgggaaggtggaattcttccgaaactgg
agaaactacaccgccggctttggtgatctaaatgatgagttctggttgggtctctcaaat
ctgcacaagatcacctcctctggtcagtatgaactgcgtgtggacctcagagacaagggc
gagacggtctacgctcagtacgacaagttctccgtgtctgaaccacgcagccgctacaag
gtgcacgtcggtggctacagtggcacagcaggagattccatgacctaccatcacggtcga
cccttctcaacctatgaccatgacaatgacatcgctgtcaccaactgtgccctgtcttac
aagggtgctttctggtataagaactgccatcgcgtcaacgtcatgggacgatatggagac
aacagccacagcaagggcgtgaactggttccactggaagggtcacgaacactccattgag
ttcgccgagatgaagatgcgacccgccaacttcaggaacttcgagggcagaaggaaacga
tcataa
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